RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 NRDE2Q9H7Z3 1164 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 RSAD1Q9HA92 442 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 IFT122Q9HBG6 1241 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
PVT1-208ENST00000519481 GJB4Q9NTQ9 266 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 RGL1Q9NZL6 768 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 C5orf42Q9H799 3197 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 CLASP2O75122 1294 aaKnown RBP12.12□□□□□ -0.47
PVT1-208ENST00000519481 ALDH2P05091 517 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 AXLP30530 894 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 SIGLEC14Q08ET2 396 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 NR5A1Q13285 461 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
PVT1-208ENST00000519481 CALCRLQ16602 461 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 MRPL10Q7Z7H8 261 aaKnown RBP12.12□□□□□ -0.47
PVT1-208ENST00000519481 FERMT3Q86UX7 667 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 HACE1Q8IYU2 909 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
PVT1-208ENST00000519481 FBXL18Q96ME1 805 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 EMILIN2Q9BXX0 1053 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 ZBP1Q9H171 429 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 ADAM7Q9H2U9 754 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 PPP4R2Q9NY27 417 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 WRAP73Q9P2S5 460 aaPredicted RBP12.12□□□□□ -0.47
PVT1-208ENST00000519481 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 IRAK3Q9Y616 596 aa12.12□□□□□ -0.47
PVT1-208ENST00000519481 TECTAO75443 2155 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 NR1I2O75469 434 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 CTDNEP1O95476 244 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 ITGA4P13612 1032 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 SP100P23497 879 aaPredicted RBP12.11□□□□□ -0.47
PVT1-208ENST00000519481 SLC11A1P49279 550 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 PTPN21Q16825 1174 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 ATAT1Q5SQI0 421 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 RARS2Q5T160 578 aaKnown RBP12.11□□□□□ -0.47
PVT1-208ENST00000519481 NOTUMQ6P988 496 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 AGMOQ6ZNB7 445 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 GTF3C6Q969F1 213 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 EIF2AK1Q9BQI3 630 aaKnown RBP12.11□□□□□ -0.47
PVT1-208ENST00000519481 TMEM175Q9BSA9 504 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
PVT1-208ENST00000519481 MEIS3P2A8K0S8 358 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 NEMFO60524 1076 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 DTNBO60941 627 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 DGAT1O75907 488 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 SLITRK3O94933 977 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 NEK4P51957 841 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 PTENP60484 403 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 NHLH1Q02575 133 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 SPIRE1Q08AE8 756 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 SAFBQ15424 915 aaKnown RBP eCLIP12.1□□□□□ -0.47
PVT1-208ENST00000519481 ME3Q16798 604 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 EARS2Q5JPH6 523 aaKnown RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 ELMSAN1Q6PJG2 1045 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 CABP7Q86V35 215 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 ALYREFQ86V81 257 aaKnown RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 TMEM173Q86WV6 379 aaPredicted RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 FBXL6Q8N531 539 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 AUTS2Q8WXX7 1259 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 TRIM6Q9C030 488 aaPredicted RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 TTC12Q9H892 705 aaPredicted RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 MINDY3Q9H8M7 445 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 MRPL17Q9NRX2 175 aaKnown RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
PVT1-208ENST00000519481 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
PVT1-208ENST00000519481 FAM205CA6NFA0 338 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 BTBD18B2RXH4 712 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 LYPLA2O95372 231 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 POMCP01189 267 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 FDPSP14324 419 aaKnown RBP12.09□□□□□ -0.47
PVT1-208ENST00000519481 KLRC2P26717 231 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 HOXA11P31270 313 aaPredicted RBP12.09□□□□□ -0.47
PVT1-208ENST00000519481 TXKP42681 527 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 FOSBP53539 338 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 PTPN5P54829 565 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 POU5F1BQ06416 359 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 UBXN11Q5T124 520 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 ERICH6BQ5W0A0 696 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 KIAA1841Q6NSI8 718 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 ZNF280BQ86YH2 543 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 UBALD2Q8IYN6 164 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 TDRD5Q8NAT2 981 aaKnown RBP12.09□□□□□ -0.47
PVT1-208ENST00000519481 NSUN7Q8NE18 718 aaKnown RBP12.09□□□□□ -0.47
PVT1-208ENST00000519481 TNFRSF25Q93038 417 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 POMKQ9H5K3 350 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 DPP7Q9UHL4 492 aa12.09□□□□□ -0.47
PVT1-208ENST00000519481 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.47
PVT1-208ENST00000519481 ZNF318Q5VUA4 2279 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 NRP1O14786 923 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms