RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 ACKR2O00590 384 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 EOMESO95936 686 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 GAP43P17677 238 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 HOXA11P31270 313 aaPredicted RBP24.9■■□□□ 1.58
SKP1-206ENST00000519321 FXR1P51114 621 aaKnown RBP eCLIP24.9■■□□□ 1.58
SKP1-206ENST00000519321 HTRA4P83105 476 aaPredicted RBP24.9■■□□□ 1.58
SKP1-206ENST00000519321 DYMQ7RTS9 669 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 TMCO2Q7Z6W1 182 aaPredicted RBP24.9■■□□□ 1.58
SKP1-206ENST00000519321 CRIPAKQ8N1N5 446 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 FSIP1Q8NA03 581 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 TIFAQ96CG3 184 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 LRCH3Q96II8 777 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 YME1L1Q96TA2 773 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 KIFC3Q9BVG8 833 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 ZHX3Q9H4I2 956 aa24.9■■□□□ 1.58
SKP1-206ENST00000519321 ADGRA3Q8IWK6 1321 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 CNTNAP2Q9UHC6 1331 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 HOXA2O43364 376 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 PBX2P40425 430 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 SYKP43405 635 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 PRPF4BQ13523 1007 aaKnown RBP24.89■■□□□ 1.58
SKP1-206ENST00000519321 ECHDC2Q86YB7 292 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 CNNM3Q8NE01 707 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 KCNN1Q92952 543 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 SLC28A3Q9HAS3 691 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 FAM105AQ9NUU6 356 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 SEL1LQ9UBV2 794 aa24.89■■□□□ 1.58
SKP1-206ENST00000519321 SLC16A4O15374 487 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 TRAK2O60296 914 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 ZNF623O75123 536 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 SLFN14P0C7P3 912 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 ARF4P18085 180 aaPredicted RBP24.88■■□□□ 1.57
SKP1-206ENST00000519321 NCKAP1LP55160 1127 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 STRN3Q13033 797 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 TMEM132AQ24JP5 1023 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 DNAJC19Q96DA6 116 aa24.88■■□□□ 1.57
SKP1-206ENST00000519321 YBX2Q9Y2T7 364 aaKnown RBP24.88■■□□□ 1.57
SKP1-206ENST00000519321 GBF1Q92538 1859 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 A0A1B0GUA9 196 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 N4BP3O15049 544 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 DGKIO75912 1065 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 MAPTP10636 758 aaKnown RBP24.87■■□□□ 1.57
SKP1-206ENST00000519321 LIG1P18858 919 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 CNNM4Q6P4Q7 775 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 FAM178BQ8IXR5 827 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 CCDC65Q8IXS2 484 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 TMEM161BQ8NDZ6 487 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 RSPH1Q8WYR4 309 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 PGBD4Q96DM1 585 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 CCDC34Q96HJ3 373 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 CPB2Q96IY4 423 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 NKX2-4Q9H2Z4 354 aa24.87■■□□□ 1.57
SKP1-206ENST00000519321 B4GALT5O43286 388 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 IDEP14735 1019 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 IBSPP21815 317 aaPredicted RBP24.86■■□□□ 1.57
SKP1-206ENST00000519321 NDUFA8P51970 172 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 ZNF697Q5TEC3 545 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 SLC27A1Q6PCB7 646 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 HAUS6Q7Z4H7 955 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 APBB1IPQ7Z5R6 666 aaPredicted RBP24.86■■□□□ 1.57
SKP1-206ENST00000519321 HACE1Q8IYU2 909 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 SP7Q8TDD2 431 aaPredicted RBP24.86■■□□□ 1.57
SKP1-206ENST00000519321 ZNF689Q96CS4 500 aaPredicted RBP24.86■■□□□ 1.57
SKP1-206ENST00000519321 C7orf25Q9BPX7 421 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 ADPGKQ9BRR6 497 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 MRPL4Q9BYD3 311 aaKnown RBP24.86■■□□□ 1.57
SKP1-206ENST00000519321 TRIM9Q9C026 710 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 TRIM6Q9C030 488 aaPredicted RBP24.86■■□□□ 1.57
SKP1-206ENST00000519321 SERTAD1Q9UHV2 236 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 PCDHB2Q9Y5E7 798 aa24.86■■□□□ 1.57
SKP1-206ENST00000519321 COL4A6Q14031 1691 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 FRMD3A2A2Y4 597 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 ACTN4O43707 911 aaKnown RBP24.85■■□□□ 1.57
SKP1-206ENST00000519321 CA3P07451 260 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 MYOGP15173 224 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 TPRNQ4KMQ1 711 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 PPP2R2DQ66LE6 453 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 STAMQ92783 540 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 PANK4Q9NVE7 773 aa24.85■■□□□ 1.57
SKP1-206ENST00000519321 K7ENM7 598 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 MYL1P05976 194 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 LONRF3Q496Y0 759 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 UBXN11Q5T124 520 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 MRPL10Q7Z7H8 261 aaKnown RBP24.84■■□□□ 1.57
SKP1-206ENST00000519321 ZNF598Q86UK7 904 aaKnown RBP24.84■■□□□ 1.57
SKP1-206ENST00000519321 CMTR2Q8IYT2 770 aaKnown RBP24.84■■□□□ 1.57
SKP1-206ENST00000519321 ABI1Q8IZP0 508 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 TMEM87AQ8NBN3 555 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 ST6GALNAC4Q9H4F1 302 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 RC3H2Q9HBD1 1191 aaKnown RBP24.84■■□□□ 1.57
SKP1-206ENST00000519321 OLFML3Q9NRN5 406 aa24.84■■□□□ 1.57
SKP1-206ENST00000519321 ASIC1P78348 528 aa24.83■■□□□ 1.57
SKP1-206ENST00000519321 BTG3Q14201 252 aaPredicted RBP24.83■■□□□ 1.57
SKP1-206ENST00000519321 HERC4Q5GLZ8 1057 aaPredicted RBP24.83■■□□□ 1.57
SKP1-206ENST00000519321 ATF7IP2Q5U623 682 aa24.83■■□□□ 1.57
SKP1-206ENST00000519321 TAS1R3Q7RTX0 852 aa24.83■■□□□ 1.57
SKP1-206ENST00000519321 SFR1Q86XK3 245 aa24.83■■□□□ 1.57
SKP1-206ENST00000519321 FIBCD1Q8N539 461 aa24.83■■□□□ 1.57
SKP1-206ENST00000519321 RNF169Q8NCN4 708 aa24.83■■□□□ 1.57
SKP1-206ENST00000519321 TMEM117Q9H0C3 514 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms