RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 MYD88Q99836 296 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 BICC1Q9H694 974 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 PA2G4Q9UQ80 394 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 USP16Q9Y5T5 823 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 B3GALT1Q9Y5Z6 326 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 ATP23Q9Y6H3 246 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 NRAPQ86VF7 1730 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 A0A1W2PQ27 194 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 A0A1W2PQ64 194 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 A0A1W2PQD8 194 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 LCHNA4D1U4 455 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 KLHL33A6NCF5 533 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 FADS2P1A8MWK0 482 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 ERVV-2B6SEH9 535 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 ERC2O15083 957 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PCDHGA12O60330 932 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 CLASP2O75122 1294 aaKnown RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 FRAT2O75474 233 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 IGLV1-40P01703 118 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 CYP17A1P05093 508 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 LPOP22079 712 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PTX3P26022 381 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 GPR3P46089 330 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 CORO7P57737 925 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 DUSP4Q13115 394 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 GTF2H3Q13889 308 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 GCKRQ14397 625 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 TMEM132BQ14DG7 1078 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 CC2D1AQ6P1N0 951 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 FRMD7Q6ZUT3 714 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 COPS6Q7L5N1 327 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 EPM2AIP1Q7L775 607 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 SLCO6A1Q86UG4 719 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 RIOX2Q8IUF8 465 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 LZTR1Q8N653 840 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 UHMK1Q8TAS1 419 aaKnown RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 TGFBRAP1Q8WUH2 860 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 LMBR1Q8WVP7 490 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 ASB11Q8WXH4 323 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 KIF1BPQ96EK5 621 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 TEKT5Q96M29 485 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 ACAP3Q96P50 834 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 ZNF700Q9H0M5 742 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 IL25Q9H293 177 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 SLC6A20Q9NP91 592 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 NMRK2Q9NPI5 230 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 ANLNQ9NQW6 1124 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 CHST12Q9NRB3 414 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 KCNH7Q9NS40 1196 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 ZNF281Q9Y2X9 895 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 NUB1Q9Y5A7 615 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PCDHGA9Q9Y5G4 932 aaKnown RBP5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PCDHGA8Q9Y5G5 932 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PCDHGA7Q9Y5G6 932 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PCDHGA6Q9Y5G7 932 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PCDHGA3Q9Y5H0 932 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 PCDHGA2Q9Y5H1 932 aa5.69□□□□□ -1.5
CTNNA1-212ENST00000518919 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 A0A1W2PQ45 241 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 A0A1W2PQY0 241 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 RNF225M0QZC1 329 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 MAFKO60675 156 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 USP2O75604 605 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 ASGR2P07307 311 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 HSPA6P17066 643 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 FSTP19883 344 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 TACR1P25103 407 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 CHMLP26374 656 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 DEKP35659 375 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 RFX5P48382 616 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 HTRA3P83110 453 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 INSM1Q01101 510 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 IKZF1Q13422 519 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 PDCD1Q15116 288 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 RABEP1Q15276 862 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 ARHGAP29Q52LW3 1261 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 IFIT1BQ5T764 474 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 PLEKHO2Q8TD55 490 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 DLG3Q92796 817 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 MTA3Q9BTC8 594 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 G6PC3Q9BUM1 346 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 DNAJC28Q9NX36 388 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 C9orf78Q9NZ63 289 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 PIM2Q9P1W9 311 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 IMPACTQ9P2X3 320 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 ZC3H7BQ9UGR2 993 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 TAF6LQ9Y6J9 622 aa5.68□□□□□ -1.5
CTNNA1-212ENST00000518919 EIF5BO60841 1220 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 PPP1R11O60927 126 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 SASH1O94885 1247 aa5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 REC8O95072 547 aa5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 LDHAP00338 332 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 GJA4P35212 333 aa5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 KIR2DL1P43626 348 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 KIR2DL2P43627 348 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-212ENST00000518919 GBX1Q14549 363 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms