RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 FAN1Q9Y2M0 1017 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 PCDHB2Q9Y5E7 798 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 ACACBO00763 2458 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 CCDC196A0A1B0GTZ2 297 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 CCDC195A0A1B0GUA6 201 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 NRP1O14786 923 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 CHMP2AO43633 222 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 MAFO75444 373 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 EFEMP2O95967 443 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 GLUD1P00367 558 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 C1RP00736 705 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 URODP06132 367 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 ADH1AP07327 375 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 SP9P0CG40 484 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 USP11P51784 963 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 MTERF2Q49AM1 385 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 LRCH2Q5VUJ6 765 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 RHPN2Q8IUC4 686 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 C1orf210Q8IVY1 113 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 BICD2Q8TD16 824 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 HDAC7Q8WUI4 952 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 TCEANC2Q96MN5 208 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 TEKT3Q9BXF9 490 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 RSAD1Q9HA92 442 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 RXFP1Q9HBX9 757 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 ANO2Q9NQ90 1003 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 SIT1Q9Y3P8 196 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 C2orf16Q68DN1 1984 aa13.87□□□□□ -0.19
TRAPPC9-204ENST00000518723 KMT2BQ9UMN6 2715 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 ANHXE9PGG2 379 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 INPPL1O15357 1258 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 TEX28O15482 410 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 PSMD10O75832 226 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 DCNP07585 359 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 AFF1P51825 1210 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 AK2P54819 239 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 TSGA10IPQ3SY00 556 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 B3GNT9Q6UX72 402 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 ZNF707Q96C28 371 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 CCDC136Q96JN2 1154 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 FAM193BQ96PV7 902 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 ARHGEF3Q9NR81 526 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 SLC2A4RGQ9NR83 387 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAPPC9-204ENST00000518723 NID2Q14112 1375 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 TMEM150BA6NC51 233 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 C2CD2LO14523 706 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 PRPF3O43395 683 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 RFPL2O75678 378 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 GLUD2P49448 558 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 MIER3Q7Z3K6 550 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 KSR1Q8IVT5 923 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 SMG7Q92540 1137 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 BORCS6Q96GS4 357 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 NLRP4Q96MN2 994 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 HINFPQ9BQA5 517 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 PLEKHA4Q9H4M7 779 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 ZDHHC7Q9NXF8 308 aa13.85□□□□□ -0.19
TRAPPC9-204ENST00000518723 WDR81Q562E7 1941 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 POMCP01189 267 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 LAMP2P13473 410 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 HOXA11P31270 313 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 DSG1Q02413 1049 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 HTR4Q13639 388 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 Q4G0T1 1027 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 SPECC1Q5M775 1068 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 UBXN11Q5T124 520 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 ANO5Q75V66 913 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 TAS1R1Q7RTX1 841 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 COLGALT2Q8IYK4 626 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 GPR65Q8IYL9 337 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 SUMF1Q8NBK3 374 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 PJA1Q8NG27 643 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 UBN1Q9NPG3 1134 aa13.84□□□□□ -0.19
TRAPPC9-204ENST00000518723 SPTBN2O15020 2390 aa13.83□□□□□ -0.19
TRAPPC9-204ENST00000518723 DOCK8Q8NF50 2099 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 DDX11L8A8MPP1 907 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 GLULP15104 373 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 STARD6P59095 220 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 DSC1Q08554 894 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 KRT32Q14532 448 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 ZNF528Q3MIS6 628 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 ADCK5Q3MIX3 580 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 DCLRE1AQ6PJP8 1040 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms