RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 PPP2R5EQ16537 467 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 TKFCQ3LXA3 575 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PARP10Q53GL7 1025 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 TNNI3KQ59H18 835 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PRAMEF19Q5SWL8 479 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 NOL8Q76FK4 1167 aaKnown RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 TMEM102Q8N9M5 508 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 MDM1Q8TC05 714 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 GATAD2BQ8WXI9 593 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 GAL3ST3Q96A11 431 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 OSBPL1AQ9BXW6 950 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 FTOQ9C0B1 505 aaKnown RBP eCLIP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 RBSNQ9H1K0 784 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PORCNQ9H237 461 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 KCNF1Q9H3M0 494 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 BCAS3Q9H6U6 928 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 CBX8Q9HC52 389 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PCDH12Q9NPG4 1184 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 JADE2Q9NQC1 790 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PFDN2Q9UHV9 154 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 FBXO4Q9UKT5 387 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 NOP58Q9Y2X3 529 aaKnown RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 NLRC5Q86WI3 1866 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 ELP1O95163 1332 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 MAP3K15Q6ZN16 1313 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 CELSR2Q9HCU4 2923 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 A0A0U1RQG5 324 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 TRIM75PA6NK02 468 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 WDR46O15213 610 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 PDPK1O15530 556 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 DIAPH1O60610 1272 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 DNAJC6O75061 913 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 CSPG5O95196 566 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 GJB6O95452 261 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 MYF5P13349 255 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 BMP6P22004 513 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 KLRK1P26718 216 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 CDK8P49336 464 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 RPS8P62241 208 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 RPS26P62854 115 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 GPLD1P80108 840 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 PTPN11Q06124 597 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 PABPC4Q13310 644 aaKnown RBP eCLIP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 MPP2Q14168 576 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SF3A2Q15428 464 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 GRIK5Q16478 980 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 CWF19L2Q2TBE0 894 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 ZNF792Q3KQV3 632 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 TAF1BQ53T94 588 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 PLEKHG4Q58EX7 1191 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 PERM1Q5SV97 790 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 NOL9Q5SY16 702 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 WDR78Q5VTH9 848 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 KIF6Q6ZMV9 814 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 REC114Q7Z4M0 266 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 FMNL3Q8IVF7 1028 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SULF2Q8IWU5 870 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SRRM1Q8IYB3 904 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 TET1Q8NFU7 2136 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 NPLOC4Q8TAT6 608 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SUSD6Q92537 303 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 APPBP2Q92624 585 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 LRRC3Q9BY71 257 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 COA1Q9GZY4 146 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SMG9Q9H0W8 520 aaKnown RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 ASCC2Q9H1I8 757 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 ANTXR1Q9H6X2 564 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 TXNRD2Q9NNW7 524 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SPATA6Q9NWH7 488 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 DLGAP2Q9P1A6 1054 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 BARX2Q9UMQ3 279 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SIT1Q9Y3P8 196 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 AFG3L2Q9Y4W6 797 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 PCDHB14Q9Y5E9 798 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 SDK1Q7Z5N4 2213 aa4.14□□□□□ -1.75
CPNE3-204ENST00000517862 MIA3Q5JRA6 1907 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 A0A087WV48 116 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 CILPO75339 1184 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 GJB5O95377 273 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 HOXC6P09630 235 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 C6P13671 934 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 CEACAM1P13688 526 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 ADSSP30520 456 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 NRLP54845 237 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 KRTAP10-2P60368 255 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 PCDH1Q08174 1060 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 EIF4A2Q14240 407 aaKnown RBP4.13□□□□□ -1.75
CPNE3-204ENST00000517862 KCNA10Q16322 511 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 C21orf62-AS1Q17RA5 79 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 MTERF2Q49AM1 385 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 CEP135Q66GS9 1140 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 GDF6Q6KF10 455 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-204ENST00000517862 PCSK4Q6UW60 755 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 C6orf15Q6UXA7 325 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-204ENST00000517862 BEND4Q6ZU67 534 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 SPATC1Q76KD6 591 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 CERS5Q8N5B7 392 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 SAMD11Q96NU1 681 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms