RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-204ENST00000517824 TMEM150BA6NC51 233 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 OATP04181 439 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 RHOXF2BP0C7M4 288 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 LIG4P49917 911 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 GTF2BQ00403 316 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 AMPD2Q01433 879 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 NEDD9Q14511 834 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 KCTD2Q14681 263 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 EMC2Q15006 297 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 PAPD7Q5XG87 772 aaKnown RBP11.69□□□□□ -0.54
SPIDR-204ENST00000517824 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 KCNV1Q6PIU1 500 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-204ENST00000517824 CTU1Q7Z7A3 348 aaKnown RBP11.69□□□□□ -0.54
SPIDR-204ENST00000517824 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-204ENST00000517824 GTF3C2Q8WUA4 911 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-204ENST00000517824 SPIRE2Q8WWL2 714 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 SLC7A3Q8WY07 619 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 POMGNT1Q8WZA1 660 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 RHOXF2Q9BQY4 288 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 SH2D3AQ9BRG2 576 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 STK33Q9BYT3 514 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 AZI2Q9H6S1 392 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 GPRC5CQ9NQ84 441 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 CYP26B1Q9NR63 512 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 DMAC2Q9NW81 257 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 TBX20Q9UMR3 447 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 AGTPBP1Q9UPW5 1226 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 EVPLQ92817 2033 aa11.69□□□□□ -0.54
SPIDR-204ENST00000517824 CCDC151A5D8V7 595 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 SPDYE5A6NIY4 337 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 F8VZ95 297 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
SPIDR-204ENST00000517824 ZNF263O14978 683 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 BUB1O43683 1085 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 ABL1P00519 1130 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 H2AFZP0C0S5 128 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 TNFAIP3P21580 790 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 ICAM3P32942 547 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 RFC5P40937 340 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 PRKCIP41743 596 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 NPTX2P47972 431 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 RTP1P59025 263 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 APBA1Q02410 837 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 PTK2Q05397 1052 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 DRAP1Q14919 205 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-204ENST00000517824 ARHGAP44Q17R89 818 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 H2AFVQ71UI9 128 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 CYFIP1Q7L576 1253 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 MAP4K3Q8IVH8 894 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 SYCE1Q8N0S2 351 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 U2AF1L4Q8WU68 220 aaKnown RBP11.68□□□□□ -0.54
SPIDR-204ENST00000517824 FIZ1Q96SL8 496 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 MMP19Q99542 508 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 NRBP2Q9NSY0 501 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 HDAC6Q9UBN7 1215 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 ADAMTS1Q9UHI8 967 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 SNX12Q9UMY4 172 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 CAPN6Q9Y6Q1 641 aa11.68□□□□□ -0.54
SPIDR-204ENST00000517824 A0A087X0T9 212 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 KIAA0391O15091 583 aaKnown RBP11.67□□□□□ -0.54
SPIDR-204ENST00000517824 ATP8B1O43520 1251 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 TLR2O60603 784 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 TBC1D8O95759 1140 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 FAM228BP0C875 321 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 USP8P40818 1118 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 JAM2P57087 298 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 CNTN2Q02246 1040 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 NAB2Q15742 525 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 SNRNP35Q16560 246 aaKnown RBP11.67□□□□□ -0.54
SPIDR-204ENST00000517824 ASTE1Q2TB18 679 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-204ENST00000517824 ANO5Q75V66 913 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 CCDC60Q8IWA6 550 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-204ENST00000517824 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 ANKRD13CQ8N6S4 541 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 CTNNBL1Q8WYA6 563 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-204ENST00000517824 FAM81BQ96LP2 452 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 CBWD1Q9BRT8 395 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 STRA6Q9BX79 667 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 PARD6BQ9BYG5 372 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 ASCC2Q9H1I8 757 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-204ENST00000517824 IKZF4Q9H2S9 585 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 KIAA1586Q9HCI6 787 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 SIX2Q9NPC8 291 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
SPIDR-204ENST00000517824 INTUQ9ULD6 942 aa11.67□□□□□ -0.54
SPIDR-204ENST00000517824 GOLGA8IPA6NC78 632 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 GOLGA8JA6NMD2 632 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 BTNL10A8MVZ5 291 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 EVI5O60447 810 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 LRRN2O75325 713 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 PALMO75781 387 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 PRLRP16471 622 aa11.66□□□□□ -0.54
SPIDR-204ENST00000517824 GARTP22102 1010 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms