RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 LAMTOR4Q0VGL1 99 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 PUM1Q14671 1186 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 CWF19L1Q69YN2 538 aaKnown RBP11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 ASTLQ6HA08 431 aaPredicted RBP11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 LRRC55Q6ZSA7 311 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 SRGAP1Q7Z6B7 1085 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 COLGALT1Q8NBJ5 622 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 FBXO18Q8NFZ0 1043 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 TCP11Q8WWU5 503 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 TMEM143Q96AN5 459 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 ANKEF1Q9NU02 776 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 ACACBO00763 2458 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 USP24Q9UPU5 2620 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 ZBTB39O15060 712 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 FGF18O76093 207 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 SRGAP2CP0DJJ0 459 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 MCM7P33993 719 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 PHKA2P46019 1235 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 EMC2Q15006 297 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 RABEP1Q15276 862 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 CLLU1OSQ5K130 101 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 PDE12Q6L8Q7 609 aaKnown RBP11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 LRRC43Q8N309 656 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 MICAL1Q8TDZ2 1067 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 RSPH1Q8WYR4 309 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 MTRQ99707 1265 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 S1PR5Q9H228 398 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 TMEM60Q9H2L4 133 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 IFT122Q9HBG6 1241 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 CDH22Q9UJ99 828 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 PIN4Q9Y237 131 aaKnown RBP11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 LZTS1Q9Y250 596 aa11.78□□□□□ -0.52
PDGFRB-203ENST00000517660 EVPLQ92817 2033 aa11.77□□□□□ -0.52
PDGFRB-203ENST00000517660 TPRP12270 2363 aaKnown RBP11.77□□□□□ -0.52
PDGFRB-203ENST00000517660 PI15O43692 258 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 ZNF623O75123 536 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 DGAT1O75907 488 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 SP100P23497 879 aaPredicted RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 RAB27AP51159 221 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 PLCB3Q01970 1234 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 KRT17Q04695 432 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 COL9A2Q14055 689 aaPredicted RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 MXD4Q14582 209 aaPredicted RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 ZNF174Q15697 407 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 KCNT2Q6UVM3 1135 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 RBM23Q86U06 439 aaKnown RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 FERMT3Q86UX7 667 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 HELQQ8TDG4 1101 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 PGBD4Q96DM1 585 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 ZNF558Q96NG5 402 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 MRPL9Q9BYD2 267 aaKnown RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 BMP2KQ9NSY1 1161 aaPredicted RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 HCSTQ9UBK5 93 aa11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 EP300Q09472 2414 aaPredicted RBP11.77□□□□□ -0.53
PDGFRB-203ENST00000517660 PPM1AP35813 382 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 TRAPPC10P48553 1259 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 RARRES1P49788 294 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 ERVFC1P60507 584 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 POU5F1BQ06416 359 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 TFDP1Q14186 410 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 PCBP1Q15365 356 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 ST3GAL2Q16842 350 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 NOSTRINQ8IVI9 506 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 RNF149Q8NC42 400 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 CCDC43Q96MW1 224 aaKnown RBP11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 TLE6Q9H808 572 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 UPF2Q9HAU5 1272 aaKnown RBP11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 TUFT1Q9NNX1 390 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 XPNPEP1Q9NQW7 623 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 AGPAT5Q9NUQ2 364 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 FAM105AQ9NUU6 356 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 SPG21Q9NZD8 308 aa11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
PDGFRB-203ENST00000517660 CARNS1A5YM72 827 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 POTEMA6NI47 508 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 FSCN2O14926 492 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 OR52Z1P0C646 297 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 SPATA31C1P0DKV0 1188 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 NPR3P17342 541 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 HOXA11P31270 313 aaPredicted RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 ARL2P36404 184 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 TECP42680 631 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 ALDH7A1P49419 539 aaKnown RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 CLCN5P51795 746 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 PTENP60484 403 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 NCBP1Q09161 790 aaKnown RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 KCNC3Q14003 757 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms