RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PCDHGA3Q9Y5H0 932 aa4.02□□□□□ -1.77
SKP1-203ENST00000517625 PCDHGA2Q9Y5H1 932 aa4.02□□□□□ -1.77
SKP1-203ENST00000517625 TSPAN6O43657 245 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 B4GALT3O60512 393 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 TRIM13O60858 407 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 TMEM127O75204 238 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 ALDH1A2O94788 518 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 ENDOD1O94919 500 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 RPLP2P05387 115 aaKnown RBP4.01□□□□□ -1.77
SKP1-203ENST00000517625 ZSCAN22P10073 491 aaPredicted RBP4.01□□□□□ -1.77
SKP1-203ENST00000517625 GYPEP15421 78 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 ZSCAN20P17040 1043 aaPredicted RBP4.01□□□□□ -1.77
SKP1-203ENST00000517625 C5AR1P21730 350 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 CYP2C19P33261 490 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 CRHR1P34998 444 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 KIR2DL3P43628 341 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 ADCY7P51828 1080 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 RAC3P60763 192 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 CDK17Q00537 523 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 CD69Q07108 199 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 ADAM15Q13444 863 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 TCIRG1Q13488 830 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 GTF2H3Q13889 308 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 MST1LQ2TV78 715 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 HSP90AB2PQ58FF8 381 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 ZFYVE27Q5T4F4 411 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 FAM102BQ5T8I3 360 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 CCDC181Q5TID7 509 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 ARHGEF18Q6ZSZ5 1173 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 GPR155Q7Z3F1 870 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 TCEAL8Q8IYN2 117 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 CHPFQ8IZ52 775 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 GPR156Q8NFN8 814 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 SNX33Q8WV41 574 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 KCNC2Q96PR1 638 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 RTFDC1Q9BY42 306 aaPredicted RBP4.01□□□□□ -1.77
SKP1-203ENST00000517625 KIAA1683Q9H0B3 1180 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 NELFAQ9H3P2 528 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 PUF60Q9UHX1 559 aaKnown RBP4.01□□□□□ -1.77
SKP1-203ENST00000517625 FAM184BQ9ULE4 1060 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 G3BP2Q9UN86 482 aaKnown RBP4.01□□□□□ -1.77
SKP1-203ENST00000517625 NR2E1Q9Y466 385 aa4.01□□□□□ -1.77
SKP1-203ENST00000517625 C2orf78A6NCI8 922 aa4□□□□□ -1.77
SKP1-203ENST00000517625 GOLGA6CA6NDK9 693 aa4□□□□□ -1.77
SKP1-203ENST00000517625 GOLGA6BA6NDN3 693 aa4□□□□□ -1.77
SKP1-203ENST00000517625 LAMTOR5O43504 91 aa4□□□□□ -1.77
SKP1-203ENST00000517625 SLC26A4O43511 780 aa4□□□□□ -1.77
SKP1-203ENST00000517625 SGTAO43765 313 aa4□□□□□ -1.77
SKP1-203ENST00000517625 ZRANB2O95218 330 aaKnown RBP eCLIP4□□□□□ -1.77
SKP1-203ENST00000517625 CNOT4O95628 575 aaKnown RBP4□□□□□ -1.77
SKP1-203ENST00000517625 IL33O95760 270 aa4□□□□□ -1.77
SKP1-203ENST00000517625 SCGB1D2O95969 90 aa4□□□□□ -1.77
SKP1-203ENST00000517625 GOLGA6DP0CG33 693 aa4□□□□□ -1.77
SKP1-203ENST00000517625 HNRNPLP14866 589 aaKnown RBP eCLIP4□□□□□ -1.778e-9■□□□□ 9.2
SKP1-203ENST00000517625 CTSSP25774 331 aa4□□□□□ -1.77
SKP1-203ENST00000517625 ECHS1P30084 290 aa4□□□□□ -1.77
SKP1-203ENST00000517625 RRADP55042 308 aa4□□□□□ -1.77
SKP1-203ENST00000517625 PPP2CBP62714 309 aa4□□□□□ -1.77
SKP1-203ENST00000517625 PPP2CAP67775 309 aa4□□□□□ -1.77
SKP1-203ENST00000517625 VMACQ2NL98 169 aa4□□□□□ -1.77
SKP1-203ENST00000517625 SLFN13Q68D06 897 aa4□□□□□ -1.77
SKP1-203ENST00000517625 PPP4R3AQ6IN85 833 aa4□□□□□ -1.77
SKP1-203ENST00000517625 MIGA2Q7L4E1 593 aa4□□□□□ -1.77
SKP1-203ENST00000517625 PIK3C3Q8NEB9 887 aa4□□□□□ -1.77
SKP1-203ENST00000517625 JPH3Q8WXH2 748 aaPredicted RBP4□□□□□ -1.77
SKP1-203ENST00000517625 HDAC10Q969S8 669 aa4□□□□□ -1.77
SKP1-203ENST00000517625 CYFIP2Q96F07 1278 aa4□□□□□ -1.77
SKP1-203ENST00000517625 TEPSINQ96N21 525 aa4□□□□□ -1.77
SKP1-203ENST00000517625 MANSC1Q9H8J5 431 aa4□□□□□ -1.77
SKP1-203ENST00000517625 BCO1Q9HAY6 547 aa4□□□□□ -1.77
SKP1-203ENST00000517625 GOLGA2P5Q9HBQ8 144 aa4□□□□□ -1.77
SKP1-203ENST00000517625 GEMIN8Q9NWZ8 242 aaKnown RBP4□□□□□ -1.77
SKP1-203ENST00000517625 GOLGA6AQ9NYA3 693 aa4□□□□□ -1.77
SKP1-203ENST00000517625 IP6K2Q9UHH9 426 aa4□□□□□ -1.77
SKP1-203ENST00000517625 RAPGEFL1Q9UHV5 662 aa4□□□□□ -1.77
SKP1-203ENST00000517625 OAZ3Q9UMX2 235 aa4□□□□□ -1.77
SKP1-203ENST00000517625 CFAP20Q9Y6A4 193 aaKnown RBP4□□□□□ -1.77
SKP1-203ENST00000517625 ERC2O15083 957 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 PRAMEF4O60810 478 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 TOX4O94842 621 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 PARNO95453 639 aaKnown RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 PF4V1P10720 104 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 RPS19P39019 145 aaKnown RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 IL12RB1P42701 662 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 BPIFB4P59827 614 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 KIF23Q02241 960 aaPredicted RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 HLTFQ14527 1009 aaKnown RBP eCLIP3.99□□□□□ -1.77
SKP1-203ENST00000517625 ODF1Q14990 250 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 UBE3CQ15386 1083 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 RNF151Q2KHN1 245 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 RRP12Q5JTH9 1297 aaKnown RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 KRT40Q6A162 431 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 PDZD4Q76G19 769 aaPredicted RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 OR7D4Q8NG98 312 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 RIN2Q8WYP3 895 aaPredicted RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 CFHR4Q92496 578 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 HOXB13Q92826 284 aaPredicted RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 COA7Q96BR5 231 aa3.99□□□□□ -1.77
SKP1-203ENST00000517625 NEIL1Q96FI4 390 aaPredicted RBP3.99□□□□□ -1.77
SKP1-203ENST00000517625 CCDC136Q96JN2 1154 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms