RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PYGMP11217 842 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 CTNNA2P26232 953 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 GCKP35557 465 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ETNPPLQ8TBG4 499 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ZNF622Q969S3 477 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCM1-203ENST00000517545 KCNK9Q9NPC2 374 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCM1-203ENST00000517545 SYNGAP1Q96PV0 1343 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 FOXN3O00409 490 aaPredicted RBP13.31□□□□□ -0.28
PCM1-203ENST00000517545 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
PCM1-203ENST00000517545 PEX19P40855 299 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 MSH2P43246 934 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 MAP2K1Q02750 393 aaPredicted RBP13.31□□□□□ -0.28
PCM1-203ENST00000517545 ADCY1Q08828 1119 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 CTTNQ14247 550 aaKnown RBP13.31□□□□□ -0.28
PCM1-203ENST00000517545 BMT2Q1RMZ1 405 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 SEPT14Q6ZU15 432 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 NGLY1Q96IV0 654 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 ZSWIM1Q9BR11 485 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 CDC42EP4Q9H3Q1 356 aaKnown RBP13.31□□□□□ -0.28
PCM1-203ENST00000517545 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 HOMER3Q9NSC5 361 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 PODXLO00592 558 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 TBCAO75347 108 aaKnown RBP13.31□□□□□ -0.28
PCM1-203ENST00000517545 UPP2O95045 317 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 COMTP21964 271 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 RPA1P27694 616 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 ZNF131P52739 623 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 MGAT5Q09328 741 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 MESDQ14696 234 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 MFSD5Q6N075 450 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 ANKLE1Q8NAG6 615 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 ART4Q93070 314 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 BTBD6Q96KE9 485 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 INTS2Q9H0H0 1204 aaKnown RBP13.31□□□□□ -0.28
PCM1-203ENST00000517545 BATF3Q9NR55 127 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
PCM1-203ENST00000517545 TTLL1O95922 423 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 FTLP02792 175 aaPredicted RBP13.3□□□□□ -0.28
PCM1-203ENST00000517545 ALAS1P13196 640 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 TAL1P17542 331 aaPredicted RBP13.3□□□□□ -0.28
PCM1-203ENST00000517545 CCND1P24385 295 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 PSMC2P35998 433 aaKnown RBP13.3□□□□□ -0.28
PCM1-203ENST00000517545 CYP2J2P51589 502 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 SPATA21Q7Z572 469 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 FAM167BQ9BTA0 163 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 STMN4Q9H169 189 aaPredicted RBP13.3□□□□□ -0.28
PCM1-203ENST00000517545 AAASQ9NRG9 546 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 CDK5RAP2Q96SN8 1893 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 AHDC1Q5TGY3 1603 aaPredicted RBP13.3□□□□□ -0.28
PCM1-203ENST00000517545 NHSQ6T4R5 1651 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 SNAP25P60880 206 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 GRIK3Q13003 919 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 SLMAPQ14BN4 828 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 TNIP1Q15025 636 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 QRICH1Q2TAL8 776 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 CGB2Q6NT52 195 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 ASRGL1Q7L266 308 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 PIGOQ8TEQ8 1089 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 KIF9Q9HAQ2 790 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 PCDHA1Q9Y5I3 950 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 ZBTB39O15060 712 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 TP73O15350 636 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 CHKAP35790 457 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 COILP38432 576 aaPredicted RBP13.3□□□□□ -0.28
PCM1-203ENST00000517545 PEX5P50542 639 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 ARHGAP4P98171 946 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 ANKRD20A2Q5SQ80 823 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 ANKRD20A1Q5TYW2 823 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 ANKRD20A3Q5VUR7 823 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 SLFN12Q8IYM2 578 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 UBL4BQ8N7F7 174 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 APEX2Q9UBZ4 518 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 PARP2Q9UGN5 583 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCM1-203ENST00000517545 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
PCM1-203ENST00000517545 EME2A4GXA9 379 aaPredicted RBP13.29□□□□□ -0.28
PCM1-203ENST00000517545 FAM86B1E9PN63 330 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 SMNDC1O75940 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCM1-203ENST00000517545 GJB6O95452 261 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 FAM86B2P0C5J1 330 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 ABL2P42684 1182 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 GABPAQ06546 454 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 MFSD14BQ5SR56 506 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 CYP2W1Q8TAV3 490 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 LENG9Q96B70 501 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 AGPAT1Q99943 283 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCM1-203ENST00000517545 ARL2BPQ9Y2Y0 163 aa13.29□□□□□ -0.28
PCM1-203ENST00000517545 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
PCM1-203ENST00000517545 CAPRIN2Q6IMN6 1127 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 621.3 ms