RNA–Protein interactions for RNA: ENST00000516516.1

RNU6-1038P-201, Transcript of RNA, U6 small nuclear 1038, pseudogene, humanhuman

BASIC

Gene RNU6-1038P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1038P-201ENST00000516516 AGO3Q9H9G7 860 aaKnown RBP4.22□□□□□ -1.73
RNU6-1038P-201ENST00000516516 NCDNQ9UBB6 729 aa4.22□□□□□ -1.73
RNU6-1038P-201ENST00000516516 MAGEL2Q9UJ55 1249 aa4.22□□□□□ -1.73
RNU6-1038P-201ENST00000516516 USP18Q9UMW8 372 aa4.22□□□□□ -1.73
RNU6-1038P-201ENST00000516516 HDAC5Q9UQL6 1122 aa4.22□□□□□ -1.73
RNU6-1038P-201ENST00000516516 SH3BP1Q9Y3L3 701 aa4.22□□□□□ -1.73
RNU6-1038P-201ENST00000516516 ELL2O00472 640 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 RECQL4O94761 1208 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 LTA4HP09960 611 aaKnown RBP4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 HNRNPLP14866 589 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PTGS2P35354 604 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ACVRL1P37023 503 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MANFP55145 182 aaKnown RBP4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ADAM8P78325 824 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 DUSP2Q05923 314 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PPARAQ07869 468 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 TUBA3CQ13748 450 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 IQSEC1Q6DN90 963 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 TUBA3EQ6PEY2 450 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 UNQ6494/PRO21346Q6UXR6 183 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 RNF180Q86T96 592 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 AMER2Q8N7J2 671 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 SLC16A11Q8NCK7 471 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 OR5M3Q8NGP4 307 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 EXTL1Q92935 676 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 GPR87Q9BY21 358 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PRSS50Q9UI38 385 aa4.21□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PRSS38A1L453 326 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ZNF202O95125 648 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 LY86O95711 162 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ADH4P08319 380 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 HSP90B1P14625 803 aaKnown RBP4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 GZMKP49863 264 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 SAFB2Q14151 953 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 RRP1BQ14684 758 aaKnown RBP4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 FSCN1Q16658 493 aaKnown RBP4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 UGT8Q16880 541 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 NAIF1Q69YI7 327 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 HTR3DQ70Z44 454 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 KRT26Q7Z3Y9 468 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 THNSL2Q86YJ6 484 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 IL17RAQ96F46 866 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 SORCS2Q96PQ0 1159 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PRRX2Q99811 253 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ZBTB21Q9ULJ3 1066 aa4.2□□□□□ -1.74
RNU6-1038P-201ENST00000516516 A0A0A6YYK5 440 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 A0A1W2PR48 441 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 DIRC3C9JPN6 131 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 TRIM24O15164 1050 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 HOXA3O43365 443 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 AKAP8O43823 692 aaKnown RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MGAT1P26572 445 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MASP1P48740 699 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 HMGA2P52926 109 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 TGFB2P61812 414 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MRPS9P82933 396 aaKnown RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CD69Q07108 199 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MGAT5Q09328 741 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MRPL49Q13405 166 aaKnown RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ANO4Q32M45 955 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ZBTB41Q5SVQ8 909 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 DOK3Q7L591 496 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 HDGFL2Q7Z4V5 671 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 SYNE4Q8N205 404 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 IL17DQ8TAD2 202 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ZNF483Q8TF39 744 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CACTINQ8WUQ7 758 aaKnown RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ATXN2LQ8WWM7 1075 aaKnown RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 FAM193BQ96PV7 902 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CDC5LQ99459 802 aaKnown RBP4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MNTQ99583 582 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 SOX7Q9BT81 388 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PPP2R3BQ9Y5P8 575 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CDY2AQ9Y6F7 541 aa4.19□□□□□ -1.74
RNU6-1038P-201ENST00000516516 B5MCH6 92 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 NPIPB8E9PQR5 432 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 VIL1P09327 827 aaKnown RBP4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ENPP1P22413 925 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CNGA1P29973 690 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CRHR1P34998 444 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 STRN3Q13033 797 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 RNF219Q5W0B1 726 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 SPTY2D1Q68D10 685 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CCDC62Q6P9F0 684 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 GIMAP6Q6P9H5 292 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PIK3C3Q8NEB9 887 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 FATE1Q969F0 183 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 DCLRE1CQ96SD1 692 aaKnown RBP4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 CPPED1Q9BRF8 314 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 ANO3Q9BYT9 981 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 MCM8Q9UJA3 840 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 HS3ST3A1Q9Y663 406 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 XDHP47989 1333 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 RPTORQ8N122 1335 aa4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 WDR33Q9C0J8 1336 aaKnown RBP4.18□□□□□ -1.74
RNU6-1038P-201ENST00000516516 TMEM191CA6NGB0 347 aa4.17□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PRR5-ARHGAP8B1AHC4 643 aa4.17□□□□□ -1.74
RNU6-1038P-201ENST00000516516 NEMP1O14524 444 aa4.17□□□□□ -1.74
RNU6-1038P-201ENST00000516516 PRAMEF4O60810 478 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms