RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.54
TRIM41-209ENST00000515834 KCNA2P16389 499 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 CENPAP49450 140 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 VAMP7P51809 220 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 ARL4CP56559 192 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 CDK17Q00537 523 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.54
TRIM41-209ENST00000515834 FGGP02679 453 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 ZSCAN26Q16670 478 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 ACAD11Q709F0 780 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 FMO2Q99518 471 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 KATNAL1Q9BW62 490 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 STX18Q9P2W9 335 aaKnown RBP11.71□□□□□ -0.54
TRIM41-209ENST00000515834 SEL1LQ9UBV2 794 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.54
TRIM41-209ENST00000515834 NOVA2Q9UNW9 492 aaKnown RBP11.71□□□□□ -0.54
TRIM41-209ENST00000515834 A0A0G2JND7 137 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 SYCE1LA8MT33 242 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 P4HBP07237 508 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 NAALADL2Q58DX5 795 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 TRIM62Q9BVG3 475 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 PCDHGB4Q9UN71 923 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 IPO5O00410 1097 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 CAPZA2P47755 286 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 TFDP2Q14188 446 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 CCDC85BQ15834 202 aaPredicted RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 ALKBH5Q6P6C2 394 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 B4GALNT2Q8NHY0 566 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 RBM41Q96IZ5 413 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 TRPV6Q9H1D0 765 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 MROH7-TTC4A0A0A0MT08 1334 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 SAMD9Q5K651 1589 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 KCNQ2O43526 872 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 RPS6KA5O75582 802 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 SEC31AO94979 1220 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 SCARF1Q14162 830 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 ZNF746Q6NUN9 644 aaPredicted RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 PLEKHA5Q9HAU0 1116 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 RGL1Q9NZL6 768 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 NRBP1Q9UHY1 535 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 ZRANB2O95218 330 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 ARHGEF7Q14155 803 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 USP33Q8TEY7 942 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 NRBF2Q96F24 287 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 NAF1Q96HR8 494 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 CYP26B1Q9NR63 512 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 KRT37O76014 449 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 DAB2P98082 770 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 FASTKD1Q53R41 847 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 COBLL1Q53SF7 1204 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 AGR3Q8TD06 166 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 KLHL29Q96CT2 875 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 PPP1R36Q96LQ0 422 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 NUP85Q9BW27 656 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 CCL15-CCL14A0A0B4J2E2 113 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 CHRNA3P32297 505 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 EPHB4P54760 987 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 SNCBQ16143 134 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 CCL15Q16663 113 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 SYCP2LQ5T4T6 812 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 C11orf57Q6ZUT1 292 aaPredicted RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 PATL1Q86TB9 770 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 APPL2Q8NEU8 664 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 ENOX1Q8TC92 643 aaKnown RBP11.7□□□□□ -0.54
TRIM41-209ENST00000515834 TSSK1BQ9BXA7 367 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 THEGQ9P2T0 379 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 PTPRTO14522 1441 aa11.7□□□□□ -0.54
TRIM41-209ENST00000515834 EFCAB6Q5THR3 1501 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 PER1O15534 1290 aaPredicted RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 STAT5BP51692 787 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 GRAMD1BQ3KR37 738 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 SPDYAQ5MJ70 313 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ASPSCR1Q9BZE9 553 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ENTPD7Q9NQZ7 604 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 NEDD4P46934 1319 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 A0A1W2PQ27 194 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 A0A1W2PQ64 194 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 A0A1W2PQD8 194 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 EFCAB14O75071 495 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 TBXAS1P24557 533 aaPredicted RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 KRT17Q04695 432 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 LRRC74AQ0VAA2 488 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 SREBF2Q12772 1141 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 AARS2Q5JTZ9 985 aaKnown RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 IER5Q5VY09 327 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 MAGEB10Q96LZ2 347 aaPredicted RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 FOPNLQ96NB1 174 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 TRIM55Q9BYV6 548 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 SH3GLB2Q9NR46 395 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms