RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 FOXD4L5Q5VV16 416 aaPredicted RBP21.41■■□□□ 1.02
LMNA-225ENST00000515824 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 LRRC55Q6ZSA7 311 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.41■■□□□ 1.02
LMNA-225ENST00000515824 KLHL23Q8NBE8 558 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 FOXD4L4Q8WXT5 416 aaPredicted RBP21.41■■□□□ 1.02
LMNA-225ENST00000515824 TRIM6Q9C030 488 aaPredicted RBP21.41■■□□□ 1.02
LMNA-225ENST00000515824 C17orf75Q9HAS0 396 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 CCDC39Q9UFE4 941 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 KCNG1Q9UIX4 513 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 TRANK1O15050 2925 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 A0A1B0GUA9 196 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 CCDC169A6NNP5 214 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 GRM6O15303 877 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 B4GALT5O43286 388 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 NCLP19338 710 aaKnown RBP21.4■■□□□ 1.02
LMNA-225ENST00000515824 TXLNAP40222 546 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 NASPP49321 788 aaPredicted RBP21.4■■□□□ 1.02
LMNA-225ENST00000515824 PEX3P56589 373 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 DMP1Q13316 513 aaPredicted RBP21.4■■□□□ 1.02
LMNA-225ENST00000515824 STK38Q15208 465 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 TMEM132AQ24JP5 1023 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 SPECC1Q5M775 1068 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 HACE1Q8IYU2 909 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 ALG13Q9NP73 1137 aaKnown RBP21.4■■□□□ 1.02
LMNA-225ENST00000515824 UBN1Q9NPG3 1134 aa21.4■■□□□ 1.02
LMNA-225ENST00000515824 RALGAPA2Q2PPJ7 1873 aa21.39■■□□□ 1.02
LMNA-225ENST00000515824 CNTNAP2Q9UHC6 1331 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 ACKR2O00590 384 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 OFD1O75665 1012 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 F13A1P00488 732 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 ITGB1P05556 798 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 PRKCBP05771 671 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 ITGA4P13612 1032 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 LIG1P18858 919 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 PLCG1P19174 1290 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 PRPF4BQ13523 1007 aaKnown RBP21.39■■□□□ 1.01
LMNA-225ENST00000515824 TIGD5Q53EQ6 642 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 NOMO2Q5JPE7 1267 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 SLC27A1Q6PCB7 646 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 AGMOQ6ZNB7 445 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 DAW1Q8N136 415 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 KRI1Q8N9T8 703 aaKnown RBP21.39■■□□□ 1.01
LMNA-225ENST00000515824 COLGALT1Q8NBJ5 622 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 SPPL3Q8TCT6 385 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 URGCPQ8TCY9 931 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 EPSTI1Q96J88 318 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 CLIC6Q96NY7 704 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 EIF2AQ9BY44 585 aaKnown RBP21.39■■□□□ 1.01
LMNA-225ENST00000515824 RSAD1Q9HA92 442 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 TFIP11Q9UBB9 837 aaKnown RBP21.39■■□□□ 1.01
LMNA-225ENST00000515824 HCSTQ9UBK5 93 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 INPP5FQ9Y2H2 1132 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 IPPQ9Y573 584 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 PRUNE2Q8WUY3 3088 aa21.39■■□□□ 1.01
LMNA-225ENST00000515824 MEIS3P2A8K0S8 358 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 SFI1A8K8P3 1242 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 K7ERI5 159 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 NPTX2P47972 431 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 DHX8Q14562 1220 aaKnown RBP21.38■■□□□ 1.01
LMNA-225ENST00000515824 KCNT2Q6UVM3 1135 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 THNSL1Q8IYQ7 743 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 LINC00301Q8NCQ3 95 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 SMG8Q8ND04 991 aaKnown RBP21.38■■□□□ 1.01
LMNA-225ENST00000515824 SYMPKQ92797 1274 aaKnown RBP21.38■■□□□ 1.01
LMNA-225ENST00000515824 ZNF558Q96NG5 402 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 KIFC3Q9BVG8 833 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 CCDC113Q9H0I3 377 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 KMT5AQ9NQR1 393 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 PRDM6Q9NQX0 595 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 KANSL3Q9P2N6 904 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
LMNA-225ENST00000515824 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
LMNA-225ENST00000515824 FNDC1Q4ZHG4 1894 aaPredicted RBP21.38■■□□□ 1.01
LMNA-225ENST00000515824 NLRC5Q86WI3 1866 aa21.38■■□□□ 1.01
LMNA-225ENST00000515824 COL4A4P53420 1690 aaPredicted RBP21.37■■□□□ 1.01
LMNA-225ENST00000515824 PHLPP2Q6ZVD8 1323 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 CARNS1A5YM72 827 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 N4BP3O15049 544 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 SPTLC2O15270 562 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 FGF18O76093 207 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 DDIT3P35638 169 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 ALDH7A1P49419 539 aaKnown RBP21.37■■□□□ 1.01
LMNA-225ENST00000515824 UBE3AQ05086 875 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 RAD51AP2Q09MP3 1159 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 MAPK7Q13164 816 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 BECN1Q14457 450 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 USP49Q70CQ1 688 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 CDR2LQ86X02 465 aaPredicted RBP21.37■■□□□ 1.01
LMNA-225ENST00000515824 POF1BQ8WVV4 589 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 RAD54LQ92698 747 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 NSUN3Q9H649 340 aaKnown RBP21.37■■□□□ 1.01
LMNA-225ENST00000515824 TMEM134Q9H6X4 195 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 BLOC1S4Q9NUP1 217 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 THEGQ9P2T0 379 aa21.37■■□□□ 1.01
LMNA-225ENST00000515824 PPP6R2O75170 966 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 NPTXRO95502 500 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 YEATS4O95619 227 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 PLS3P13797 630 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 PPM1AP35813 382 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms