RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 MIA3Q5JRA6 1907 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 ZNF862O60290 1169 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 DDHD2O94830 711 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 SOD2P04179 222 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 RAB27AP51159 221 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 GPC5P78333 572 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 NUCB1Q02818 461 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 PPM1JQ5JR12 505 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 ZBTB44Q8NCP5 570 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 PHKBQ93100 1093 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 BORCS6Q96GS4 357 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 FAM193BQ96PV7 902 aaPredicted RBP11.84□□□□□ -0.51
CLDND1-231ENST00000515620 RPP25Q9BUL9 199 aaKnown RBP11.84□□□□□ -0.51
CLDND1-231ENST00000515620 HERC2P3Q9BVR0 1158 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 ZSCAN32Q9NX65 697 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 FAN1Q9Y2M0 1017 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 PRG3Q9Y2Y8 225 aaPredicted RBP11.84□□□□□ -0.51
CLDND1-231ENST00000515620 MTF2Q9Y483 593 aaPredicted RBP11.84□□□□□ -0.51
CLDND1-231ENST00000515620 SLC12A7Q9Y666 1083 aa11.84□□□□□ -0.51
CLDND1-231ENST00000515620 MYH9P35579 1960 aaKnown RBP11.83□□□□□ -0.52
CLDND1-231ENST00000515620 A0A087WZ62 844 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 SMCO2A6NFE2 343 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 NRP1O14786 923 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 ALDH2P05091 517 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 TGM1P22735 817 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 GLUD2P49448 558 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 CLK2P49760 499 aaKnown RBP11.83□□□□□ -0.52
CLDND1-231ENST00000515620 AFF1P51825 1210 aaKnown RBP11.83□□□□□ -0.52
CLDND1-231ENST00000515620 SETQ01105 290 aaPredicted RBP11.83□□□□□ -0.52
CLDND1-231ENST00000515620 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
CLDND1-231ENST00000515620 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
CLDND1-231ENST00000515620 UGCGQ16739 394 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 TSSK4Q6SA08 328 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 AGMOQ6ZNB7 445 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 TAS1R1Q7RTX1 841 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 TMTC2Q8N394 836 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 RUFY2Q8WXA3 655 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 FGF14Q92915 247 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 PGBD4Q96DM1 585 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 TMEM87BQ96K49 555 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 FDXACB1Q9BRP7 624 aaPredicted RBP11.83□□□□□ -0.52
CLDND1-231ENST00000515620 TMEM175Q9BSA9 504 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 MTA3Q9BTC8 594 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 RSAD1Q9HA92 442 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 NRBP2Q9NSY0 501 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 MARCH5Q9NX47 278 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 SSX2IPQ9Y2D8 614 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 PCDHB2Q9Y5E7 798 aa11.83□□□□□ -0.52
CLDND1-231ENST00000515620 ATRXP46100 2492 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 FAM170BA6NMN3 283 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 WDR64B1ANS9 1081 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 LILRB5O75023 590 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 ZNF623O75123 536 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 POMCP01189 267 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 CD72P21854 359 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 FSHRP23945 695 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 MCM5P33992 734 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 PARM1Q6UWI2 310 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 PALB2Q86YC2 1186 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 GLYCTKQ8IVS8 523 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 DDX23Q9BUQ8 820 aaKnown RBP11.82□□□□□ -0.52
CLDND1-231ENST00000515620 NT5C3AQ9H0P0 336 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 LTB4R2Q9NPC1 389 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 ZDHHC7Q9NXF8 308 aa11.82□□□□□ -0.52
CLDND1-231ENST00000515620 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.82□□□□□ -0.52
CLDND1-231ENST00000515620 CHMP2AO43633 222 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 TBC1D4O60343 1298 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 CYP3A4P08684 503 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 GSPT1P15170 499 aaKnown RBP11.81□□□□□ -0.52
CLDND1-231ENST00000515620 LIFRP42702 1097 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 OR1G1P47890 313 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 PRKCQQ04759 706 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 SPEM2Q0P670 501 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 LPAL2Q16609 132 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 MTERF2Q49AM1 385 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 SLC44A4Q53GD3 710 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 PRR16Q569H4 304 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 RHPN2Q8IUC4 686 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 NETO1Q8TDF5 533 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 HDAC7Q8WUI4 952 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 CRYGNQ8WXF5 182 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 B3GALT6Q96L58 329 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 NLRP4Q96MN2 994 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
CLDND1-231ENST00000515620 PLEKHA4Q9H4M7 779 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 RXFP1Q9HBX9 757 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 DISC1Q9NRI5 854 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 BARHL2Q9NY43 387 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 SEPT9Q9UHD8 586 aaPredicted RBP11.81□□□□□ -0.52
CLDND1-231ENST00000515620 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
CLDND1-231ENST00000515620 MYH15Q9Y2K3 1946 aa11.81□□□□□ -0.52
CLDND1-231ENST00000515620 CNTNAP2Q9UHC6 1331 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms