RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
SDHAP3-202ENST00000515467 LARSQ9P2J5 1176 aaKnown RBP17.55■□□□□ 0.4
SDHAP3-202ENST00000515467 PCDHA7Q9UN72 937 aa17.55■□□□□ 0.4
SDHAP3-202ENST00000515467 STXBP5LQ9Y2K9 1186 aa17.55■□□□□ 0.4
SDHAP3-202ENST00000515467 A0A1B0GUA9 196 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 TBKBP1A7MCY6 615 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 PRKCBP05771 671 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 RB1P06400 928 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 ARF4P18085 180 aaPredicted RBP17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 RAD51AP2Q09MP3 1159 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 PRPF4BQ13523 1007 aaKnown RBP17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 TMEM132AQ24JP5 1023 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 TMEM192Q8IY95 271 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 HACE1Q8IYU2 909 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 LRRC15Q8TF66 581 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 CLP1Q92989 425 aaKnown RBP17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 LRRC27Q9C0I9 530 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 CUEDC2Q9H467 287 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 CERS4Q9HA82 394 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 UBN1Q9NPG3 1134 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 PCDHB2Q9Y5E7 798 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 ARID2Q68CP9 1835 aa17.54■□□□□ 0.4
SDHAP3-202ENST00000515467 SFI1A8K8P3 1242 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 N4BP3O15049 544 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 FAM13AO94988 1023 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 FGFR1P11362 822 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 BMPR1AP36894 532 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 GIT2Q14161 759 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 PAN2Q504Q3 1202 aaKnown RBP17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 UBXN11Q5T124 520 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 SLC27A1Q6PCB7 646 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 SHC4Q6S5L8 630 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 APBB1IPQ7Z5R6 666 aaPredicted RBP17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 IQUBQ8NA54 791 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 FBXO22Q8NEZ5 403 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 CPB2Q96IY4 423 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 TRIM6Q9C030 488 aaPredicted RBP17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 CCDC113Q9H0I3 377 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 AAASQ9NRG9 546 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 LOXHD1Q8IVV2 1947 aa17.53■□□□□ 0.4
SDHAP3-202ENST00000515467 CNTNAP2Q9UHC6 1331 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 NPHP3-ACAD11A0A0J9YXS1 232 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 TBCAO75347 108 aaKnown RBP17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 FOSL2P15408 326 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 LIG1P18858 919 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 ABCD1P33897 745 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 EPC2Q52LR7 807 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 NAALADL2Q58DX5 795 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 GLB1LQ6UWU2 654 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 MYCT1Q8N699 235 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 PDILTQ8N807 584 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 CASD1Q96PB1 797 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 REEP2Q9BRK0 252 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 C17orf80Q9BSJ5 609 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 PLVAPQ9BX97 442 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 MRPL9Q9BYD2 267 aaKnown RBP17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 PARVGQ9HBI0 331 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 ARHGAP28Q9P2N2 729 aa17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.4
SDHAP3-202ENST00000515467 CHD9Q3L8U1 2897 aa17.52■□□□□ 0.39
SDHAP3-202ENST00000515467 COL4A6Q14031 1691 aa17.52■□□□□ 0.39
SDHAP3-202ENST00000515467 CARNS1A5YM72 827 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 SLC16A4O15374 487 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 B4GALT5O43286 388 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 GTPBP6O43824 516 aaPredicted RBP17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 ITGA4P13612 1032 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 POU3F3P20264 500 aaPredicted RBP17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 GATMP50440 423 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 ZNF131P52739 623 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 AMPD3Q01432 767 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 STRN3Q13033 797 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 CSPP1Q1MSJ5 1256 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 SPOUT1Q5T280 376 aaKnown RBP17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 RESP18Q5W5W9 173 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 ADALQ6DHV7 355 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 ADPGKQ9BRR6 497 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 C11orf84Q9BUA3 381 aaPredicted RBP17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 KIFC3Q9BVG8 833 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 RNF19AQ9NV58 838 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 LMCD1Q9NZU5 365 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 KANSL3Q9P2N6 904 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 MTUS1Q9ULD2 1270 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 PCDHB12Q9Y5F1 795 aa17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 MRPL42Q9Y6G3 142 aaKnown RBP17.51■□□□□ 0.39
SDHAP3-202ENST00000515467 A0A087X0B3 334 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 C5orf67F2Z3F1 127 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 IGFBP4P22692 258 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 CMA1P23946 247 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 CTNNB1P35222 781 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 NOMO2Q5JPE7 1267 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 CLLU1OSQ5K130 101 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 LRRC43Q8N309 656 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 TMEM161BQ8NDZ6 487 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 HELQQ8TDG4 1101 aa17.5■□□□□ 0.39
SDHAP3-202ENST00000515467 DDX12PQ92771 950 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms