RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 LILRB3O75022 631 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 CDC45O75419 566 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 TDP2O95551 362 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 PSMC5P62195 406 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 ANGPT1Q15389 498 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 DTWD2Q8NBA8 298 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 KCNB2Q92953 911 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 AGXT2Q9BYV1 514 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 MAN1C1Q9NR34 630 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 PCDHA4Q9UN74 947 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 SSX2IPQ9Y2D8 614 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
LMNA-223ENST00000515459 NRP1O14786 923 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 SOD2P04179 222 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 URODP06132 367 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 RPS6KB1P23443 525 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 ID4P47928 161 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 AFF1P51825 1210 aaKnown RBP17.64■□□□□ 0.41
LMNA-223ENST00000515459 PLA2G4FQ68DD2 849 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 ELMSAN1Q6PJG2 1045 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 SRGAP1Q7Z6B7 1085 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 CMASQ8NFW8 434 aaPredicted RBP17.64■□□□□ 0.41
LMNA-223ENST00000515459 ETNPPLQ8TBG4 499 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 SLC7A3Q8WY07 619 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 STAMQ92783 540 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 DPP7Q9UHL4 492 aa17.64■□□□□ 0.41
LMNA-223ENST00000515459 C2CD2LO14523 706 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 NARSO43776 548 aaKnown RBP17.63■□□□□ 0.41
LMNA-223ENST00000515459 POMCP01189 267 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 ADH1AP07327 375 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 GBP2P32456 591 aaPredicted RBP17.63■□□□□ 0.41
LMNA-223ENST00000515459 AK2P54819 239 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 CCT2P78371 535 aaKnown RBP17.63■□□□□ 0.41
LMNA-223ENST00000515459 NONOQ15233 471 aaKnown RBP eCLIP17.63■□□□□ 0.41
LMNA-223ENST00000515459 MOXD1Q6UVY6 613 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 CYP26C1Q6V0L0 522 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 EXOC8Q8IYI6 725 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 MBOAT7Q96N66 472 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 RPS6KC1Q96S38 1066 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 NCOA5Q9HCD5 579 aaKnown RBP17.63■□□□□ 0.41
LMNA-223ENST00000515459 WDR6Q9NNW5 1121 aaKnown RBP17.63■□□□□ 0.41
LMNA-223ENST00000515459 WNT16Q9UBV4 365 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 SNX14Q9Y5W7 946 aa17.63■□□□□ 0.41
LMNA-223ENST00000515459 CCDC195A0A1B0GUA6 201 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 STK25O00506 426 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 DKC1O60832 514 aaKnown RBP eCLIP17.62■□□□□ 0.41
LMNA-223ENST00000515459 N4BP1O75113 896 aaKnown RBP17.62■□□□□ 0.41
LMNA-223ENST00000515459 CFHP08603 1231 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 SRGAP2CP0DJJ0 459 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 PDIA3P30101 505 aaKnown RBP17.62■□□□□ 0.41
LMNA-223ENST00000515459 HOXA11P31270 313 aaPredicted RBP17.62■□□□□ 0.41
LMNA-223ENST00000515459 HSPA4P34932 840 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 QARSP47897 775 aaKnown RBP17.62■□□□□ 0.41
LMNA-223ENST00000515459 UBXN11Q5T124 520 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 BLIDQ8IZY5 108 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 PRPF31Q8WWY3 499 aaKnown RBP17.62■□□□□ 0.41
LMNA-223ENST00000515459 PSPC1Q8WXF1 523 aaKnown RBP17.62■□□□□ 0.41
LMNA-223ENST00000515459 HERC2P3Q9BVR0 1158 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 RHOBTB2Q9BYZ6 727 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 MINDY3Q9H8M7 445 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 UBN1Q9NPG3 1134 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 DDX25Q9UHL0 483 aaKnown RBP17.62■□□□□ 0.41
LMNA-223ENST00000515459 PPME1Q9Y570 386 aa17.62■□□□□ 0.41
LMNA-223ENST00000515459 TDRD15B5MCY1 1934 aaKnown RBP17.61■□□□□ 0.41
LMNA-223ENST00000515459 M0R2N6 131 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 EML1O00423 815 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 INPPL1O15357 1258 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 TEX28O15482 410 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 GLUD1P00367 558 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 NCLP19338 710 aaKnown RBP17.61■□□□□ 0.41
LMNA-223ENST00000515459 RFX1P22670 979 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 NPEPPSP55786 919 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 EVCP57679 992 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
LMNA-223ENST00000515459 COLGALT2Q8IYK4 626 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 DAGLBQ8NCG7 672 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 RSAD2Q8WXG1 361 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 TMEM143Q96AN5 459 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 CEP170P1Q96L14 293 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 SLKQ9H2G2 1235 aaPredicted RBP17.61■□□□□ 0.41
LMNA-223ENST00000515459 DHX33Q9H6R0 707 aaKnown RBP17.61■□□□□ 0.41
LMNA-223ENST00000515459 MARCH5Q9NX47 278 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 EPS15L1Q9UBC2 864 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 PRG3Q9Y2Y8 225 aaPredicted RBP17.61■□□□□ 0.41
LMNA-223ENST00000515459 CLUHO75153 1309 aa17.61■□□□□ 0.41
LMNA-223ENST00000515459 MTCL1Q9Y4B5 1905 aaKnown RBP17.6■□□□□ 0.41
LMNA-223ENST00000515459 VPS13AQ96RL7 3174 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 DEXIO95424 95 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 ITGA4P13612 1032 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 PSMA5P28066 241 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 RFC5P40937 340 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 OR1G1P47890 313 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 GLUD2P49448 558 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 LAMTOR4Q0VGL1 99 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 PPP2R5CQ13362 524 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 TAS1R1Q7RTX1 841 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 SLC44A3Q8N4M1 653 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms