RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 RGS18Q9NS28 235 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 COL4A3BPQ9Y5P4 624 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 CHD9Q3L8U1 2897 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 COL6A3P12111 3177 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 CHD7Q9P2D1 2997 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 C9IYK1 514 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 LAD1O00515 517 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 LPXNO60711 386 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 DGKIO75912 1065 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 CCT6AP40227 531 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 PRPHP41219 470 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 DNM2P50570 870 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 LAMTOR4Q0VGL1 99 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 PDIA5Q14554 519 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 NR6A1Q15406 480 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 SF3A1Q15459 793 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 DTHD1Q6ZMT9 781 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 HSCBQ8IWL3 235 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 ERMNQ8TAM6 284 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 PSPC1Q8WXF1 523 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 JPH2Q9BR39 696 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 GCOM2Q9BZD3 368 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 ATP6V0A4Q9HBG4 840 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 POLD4Q9HCU8 107 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 KIAA1024Q9UPX6 916 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 CLIC4Q9Y696 253 aa12.26□□□□□ -0.45
UBE2D3-232ENST00000514755 DENND3A2RUS2 1198 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 E9PMD0 336 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 DGAT1O75907 488 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 XRCC6P12956 609 aaKnown RBP eCLIP12.25□□□□□ -0.454e-17■□□□□ 10.6
UBE2D3-232ENST00000514755 PDCP20941 246 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 GLRA2P23416 452 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 ARL2P36404 184 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 SARSP49591 514 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 ERVK-21P61565 698 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 FAM102BQ5T8I3 360 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 BRAPQ7Z569 592 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 ZNF410Q86VK4 478 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 NPAS4Q8IUM7 802 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 RNF149Q8NC42 400 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 GDPD5Q8WTR4 605 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 PNMA5Q96PV4 448 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 NACC1Q96RE7 527 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 DDX19AQ9NUU7 478 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 DBR1Q9UK59 544 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 EYSQ5T1H1 3165 aa12.25□□□□□ -0.45
UBE2D3-232ENST00000514755 STX6O43752 255 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 FGFR1P11362 822 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 IGFBP4P22692 258 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 FAM189BP81408 668 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 GRB10Q13322 594 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 CAPSQ13938 189 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 PTPAQ15257 358 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 PAN2Q504Q3 1202 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 SLC24A5Q71RS6 500 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 NLRC5Q86WI3 1866 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 ADGRA3Q8IWK6 1321 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 EXOC8Q8IYI6 725 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 MAFAQ8NHW3 353 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 EPS8L1Q8TE68 723 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 LRRC15Q8TF66 581 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 TCP11Q8WWU5 503 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 CCDC43Q96MW1 224 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 TGS1Q96RS0 853 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 GAS2L1Q99501 681 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 PLIN2Q99541 437 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 POLR3FQ9H1D9 316 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 BHMT2Q9H2M3 363 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 RNF19AQ9NV58 838 aa12.24□□□□□ -0.45
UBE2D3-232ENST00000514755 FNDC1Q4ZHG4 1894 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 KIAA1671Q9BY89 1806 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 GAS2O43903 313 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 GPR37L1O60883 481 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 ZSCAN20P17040 1043 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 ATF7P17544 494 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 MUTP22033 750 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 CTHP32929 405 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 CDC42EP1Q00587 391 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 CEBPZQ03701 1054 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 PKP1Q13835 747 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 ZRSR1Q15695 479 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 EPC2Q52LR7 807 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 PLA2G2CQ5R387 149 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 FOXD4L5Q5VV16 416 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 KRT79Q5XKE5 535 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 ARL6IP4Q66PJ3 421 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 PTCRAQ6ISU1 281 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 CATSPER4Q7RTX7 472 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 FIBCD1Q8N539 461 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 FOXD4L4Q8WXT5 416 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 BSNDQ8WZ55 320 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms