RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 AMHR2Q16671 573 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 LONRF3Q496Y0 759 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 NOMO2Q5JPE7 1267 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 AGMOQ6ZNB7 445 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 TMEM173Q86WV6 379 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 C4orf32Q8N8J7 132 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 CCDC51Q96ER9 411 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 POLR3FQ9H1D9 316 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 NRDE2Q9H7Z3 1164 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 RSAD1Q9HA92 442 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 HIDE1A8MVS5 230 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 ST18O60284 1047 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 B4GALT3O60512 393 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 RPA1P27694 616 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 ALDH7A1P49419 539 aaKnown RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 FXR2P51116 673 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■■■ 27.9
HMGXB3-205ENST00000514469 RBM10P98175 930 aaKnown RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 NBR1Q14596 966 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 SMC1AQ14683 1233 aaKnown RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 NOTUMQ6P988 496 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 TMEM184AQ6ZMB5 413 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 SMG8Q8ND04 991 aaKnown RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 URGCPQ8TCY9 931 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 BCL7CQ8WUZ0 217 aaPredicted RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 POP1Q99575 1024 aaKnown RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 ZBP1Q9H171 429 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 INPP5FQ9Y2H2 1132 aa11.62□□□□□ -0.55
HMGXB3-205ENST00000514469 A0A087WWV3 80 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 NT5C1B-RDH14C9J2C7 533 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 INO80B-WBP1J3KQ70 363 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 INPPL1O15357 1258 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 CD2BP2O95400 341 aaKnown RBP11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 GALTP07902 379 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 SRGAP2BP0DMP2 458 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 COL9A1P20849 921 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 MUTP22033 750 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 SLC11A1P49279 550 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 TOB1P50616 345 aaPredicted RBP11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 AFF1P51825 1210 aaKnown RBP11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 HAUS3Q68CZ6 603 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 CDCA2Q69YH5 1023 aaPredicted RBP11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 TMC7Q7Z402 723 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 ZNF280BQ86YH2 543 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 TMEM169Q96HH4 297 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 IGSF21Q96ID5 467 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 NACC1Q96RE7 527 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 CSRNP2Q9H175 543 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 UBN1Q9NPG3 1134 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 GPRC5CQ9NQ84 441 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 DNAJB4Q9UDY4 337 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 USP15Q9Y4E8 981 aaPredicted RBP11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 IPPQ9Y573 584 aa11.61□□□□□ -0.55
HMGXB3-205ENST00000514469 ZMYM2Q9UBW7 1377 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 C2orf71A6NGG8 1288 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 GPR37L1O60883 481 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 DDHD2O94830 711 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 ARF4P18085 180 aaPredicted RBP11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 ANKRD54Q6NXT1 300 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 DDX53Q86TM3 631 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 VPS52Q8N1B4 723 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 MRPL43Q8N983 215 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 IGSF22Q8N9C0 903 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 SUSD6Q92537 303 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 TMX3Q96JJ7 454 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 TMEM175Q9BSA9 504 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 VN1R3Q9BXE9 311 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 GBP3Q9H0R5 595 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 UPF2Q9HAU5 1272 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 PCDHB6Q9Y5E3 794 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 IRAK3Q9Y616 596 aa11.6□□□□□ -0.55
HMGXB3-205ENST00000514469 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 LRRIQ4A6NIV6 560 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 LAD1O00515 517 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 B4GALT5O43286 388 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 DCXO43602 365 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 CTSAP10619 480 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 ITGA4P13612 1032 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 ALADP13716 330 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 NCBP1Q09161 790 aaKnown RBP11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 PDIA5Q14554 519 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 ECM1Q16610 540 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 FAM187BQ17R55 369 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 TMEM31Q5JXX7 168 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 LLGL2Q6P1M3 1020 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 SLC27A1Q6PCB7 646 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 PADI6Q6TGC4 694 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 MAEAQ7L5Y9 396 aa11.59□□□□□ -0.55
HMGXB3-205ENST00000514469 BSNDQ8WZ55 320 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms