RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ELF2Q15723 593 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 HSDL1Q3SXM5 330 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 EPC2Q52LR7 807 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 PLPPR4Q7Z2D5 763 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 CBWD2Q8IUF1 395 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 C2orf69Q8N8R5 385 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 BBXQ8WY36 941 aaPredicted RBP16.26■□□□□ 0.19
VCAN-211ENST00000513984 STK33Q9BYT3 514 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
VCAN-211ENST00000513984 A0A087X0T9 212 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 ANO9A1A5B4 782 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 MACROD2A1Z1Q3 448 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 GOLGA8IPA6NC78 632 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 GOLGA8JA6NMD2 632 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 F8VZ95 297 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 NOP56O00567 594 aaKnown RBP16.25■□□□□ 0.19
VCAN-211ENST00000513984 MAFO75444 373 aaPredicted RBP16.25■□□□□ 0.19
VCAN-211ENST00000513984 FAM228BP0C875 321 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 FERP16591 822 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 STAT1P42224 750 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 CETN1Q12798 172 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 TTLL4Q14679 1199 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 SPRYD7Q5W111 196 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 ARMCX2Q7L311 632 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 ZNF571Q7Z3V5 609 aaPredicted RBP16.25■□□□□ 0.19
VCAN-211ENST00000513984 MTERF4Q7Z6M4 381 aaKnown RBP16.25■□□□□ 0.19
VCAN-211ENST00000513984 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 DHX37Q8IY37 1157 aaKnown RBP16.25■□□□□ 0.19
VCAN-211ENST00000513984 TMC2Q8TDI7 906 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 SCFD2Q8WU76 684 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 SAAL1Q96ER3 474 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
VCAN-211ENST00000513984 ATP8B3O60423 1300 aa16.25■□□□□ 0.19
VCAN-211ENST00000513984 STRNO43815 780 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
VCAN-211ENST00000513984 PIGRP01833 764 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 ADORA2AP29274 412 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 SOX5P35711 763 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 MKRN3Q13064 507 aaKnown RBP16.24■□□□□ 0.19
VCAN-211ENST00000513984 ERCC6LQ2NKX8 1250 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 PAPD7Q5XG87 772 aaKnown RBP16.24■□□□□ 0.19
VCAN-211ENST00000513984 TRAPPC11Q7Z392 1133 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 TRIM58Q8NG06 486 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 PARD3BQ8TEW8 1205 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 POMGNT1Q8WZA1 660 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 GPR88Q9GZN0 384 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 RRAGCQ9HB90 399 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 ADAMTS1Q9UHI8 967 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 STYXL1Q9Y6J8 313 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 GAS2O43903 313 aaKnown RBP16.24■□□□□ 0.19
VCAN-211ENST00000513984 TXNP10599 105 aaKnown RBP16.24■□□□□ 0.19
VCAN-211ENST00000513984 GCLMP48507 274 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 MXI1P50539 228 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 DRAP1Q14919 205 aaPredicted RBP16.24■□□□□ 0.19
VCAN-211ENST00000513984 WHAMMP3Q1A5X7 153 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 C10orf76Q5T2E6 689 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
VCAN-211ENST00000513984 GPD1LQ8N335 351 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 CEP112Q8N8E3 955 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 ATP8B4Q8TF62 1192 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 VTI1AQ96AJ9 217 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 BICD1Q96G01 975 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 NENFQ9UMX5 172 aa16.24■□□□□ 0.19
VCAN-211ENST00000513984 KIAA0391O15091 583 aaKnown RBP16.23■□□□□ 0.19
VCAN-211ENST00000513984 TACC1O75410 805 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 GFPT2O94808 682 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 ATP1A1P05023 1023 aaKnown RBP16.23■□□□□ 0.19
VCAN-211ENST00000513984 SLC26A2P50443 739 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 CYP24A1Q07973 514 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 STRN3Q13033 797 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 ENOX2Q16206 610 aaKnown RBP16.23■□□□□ 0.19
VCAN-211ENST00000513984 PHLDB3Q6NSJ2 640 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 RSRC2Q7L4I2 434 aaKnown RBP16.23■□□□□ 0.19
VCAN-211ENST00000513984 SRGAP1Q7Z6B7 1085 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 USP37Q86T82 979 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 EXOC8Q8IYI6 725 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 RNF10Q8N5U6 811 aaKnown RBP16.23■□□□□ 0.19
VCAN-211ENST00000513984 DEPTORQ8TB45 409 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 UBXN4Q92575 508 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 GLG1Q92896 1179 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 PARK7Q99497 189 aaKnown RBP16.23■□□□□ 0.19
VCAN-211ENST00000513984 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
VCAN-211ENST00000513984 TMEM134Q9H6X4 195 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 VTA1Q9NP79 307 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
VCAN-211ENST00000513984 DOCK3Q8IZD9 2030 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 LRRIQ4A6NIV6 560 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 LRRIQ3A6PVS8 624 aaPredicted RBP16.22■□□□□ 0.19
VCAN-211ENST00000513984 ZBTB42B2RXF5 422 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 EVI5O60447 810 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 GTF2H1P32780 548 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 LIG4P49917 911 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms