RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 ZNF720Q7Z2F6 126 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
HTT-213ENST00000513806 NELFCDQ8IXH7 590 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 KIAA0895Q8NCT3 520 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 ADAM2Q99965 735 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 GDF15Q99988 308 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 TARS2Q9BW92 718 aaKnown RBP12.47□□□□□ -0.41
HTT-213ENST00000513806 UBE2OQ9C0C9 1292 aaKnown RBP12.47□□□□□ -0.41
HTT-213ENST00000513806 FZD8Q9H461 694 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 MAN1B1Q9UKM7 699 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 MAPK8IP1Q9UQF2 711 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 LAMA2P24043 3122 aaKnown RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 KIAA1671Q9BY89 1806 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 PHLPP2Q6ZVD8 1323 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 PVALEFA0A1B0GWK0 134 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 ANKRD63C9JTQ0 380 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 GPR182O15218 404 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 PPP1R37O75864 691 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 ERLIN2O94905 339 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 FGBP02675 491 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 HARSP12081 509 aaKnown RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 SFPQP23246 707 aaKnown RBP eCLIP12.46□□□□□ -0.41
HTT-213ENST00000513806 HOXA11P31270 313 aaPredicted RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 HOXD13P35453 343 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 SMTNP53814 917 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 CDC42EP1Q00587 391 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 POU5F1BQ06416 359 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 PRPF4BQ13523 1007 aaKnown RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 DSC3Q14574 896 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 MAPK6Q16659 721 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 KANK3Q6NY19 840 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 FAM117BQ6P1L5 589 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 SLC39A4Q6P5W5 647 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 ZBTB33Q86T24 672 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 SMARCE1Q969G3 411 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 NTPCRQ9BSD7 190 aaKnown RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 NFKBIZQ9BYH8 718 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 HAPLN2Q9GZV7 340 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 NUP62CLQ9H1M0 184 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 C2orf40Q9H1Z8 148 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 C17orf75Q9HAS0 396 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 AGPAT5Q9NUQ2 364 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 RNF19AQ9NV58 838 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 PRMT7Q9NVM4 692 aaPredicted RBP12.46□□□□□ -0.41
HTT-213ENST00000513806 TMEM63CQ9P1W3 806 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 TBX20Q9UMR3 447 aa12.46□□□□□ -0.41
HTT-213ENST00000513806 ZMYM2Q9UBW7 1377 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 TDRD15B5MCY1 1934 aaKnown RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 PDCD11Q14690 1871 aaKnown RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 MEIS3P2A8K0S8 358 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 GRXCR1A8MXD5 290 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 ACKR2O00590 384 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 ENPP3O14638 875 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 UPP2O95045 317 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 NPTXRO95502 500 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 GATMP50440 423 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 WDR5P61964 334 aaKnown RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 GTF2BQ00403 316 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 SEZ6Q53EL9 994 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 UBXN11Q5T124 520 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 FAM109BQ6ICB4 259 aaPredicted RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 CAVIN1Q6NZI2 390 aaKnown RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 ZSWIM2Q8NEG5 633 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 SCFD1Q8WVM8 642 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 LPPQ93052 612 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 BICD1Q96G01 975 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 ACO2Q99798 780 aaKnown RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 PDZD7Q9H5P4 517 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 TMEM134Q9H6X4 195 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 OLFML3Q9NRN5 406 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 HES2Q9Y543 173 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 SQORQ9Y6N5 450 aa12.45□□□□□ -0.42
HTT-213ENST00000513806 RANBP2P49792 3224 aaKnown RBP12.45□□□□□ -0.42
HTT-213ENST00000513806 CNTNAP2Q9UHC6 1331 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 RHOBTB3O94955 611 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 PARNO95453 639 aaKnown RBP12.44□□□□□ -0.42
HTT-213ENST00000513806 BMP6P22004 513 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 SARSP49591 514 aaKnown RBP12.44□□□□□ -0.42
HTT-213ENST00000513806 EFNA5P52803 228 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 STRN3Q13033 797 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 IKBKEQ14164 716 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 FAM187BQ17R55 369 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
HTT-213ENST00000513806 ATF7IP2Q5U623 682 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 PSRC1Q6PGN9 363 aaPredicted RBP12.44□□□□□ -0.42
HTT-213ENST00000513806 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
HTT-213ENST00000513806 MYOCDQ8IZQ8 938 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 CEP120Q8N960 986 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 RNF169Q8NCN4 708 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 APOL6Q9BWW8 343 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 CXCL16Q9H2A7 254 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms