RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 FBXO47Q5MNV8 452 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 ODR4Q5SWX8 454 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 CDCA2Q69YH5 1023 aaPredicted RBP8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 MFSD5Q6N075 450 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 FAM43BQ6ZT52 329 aaPredicted RBP8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 UNC13DQ70J99 1090 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 SFR1Q86XK3 245 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 ZBTB8OSQ8IWT0 167 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 FAM178BQ8IXR5 827 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 GRAMD1CQ8IYS0 662 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 TMEM199Q8N511 208 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 DEPTORQ8TB45 409 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 SPIRE2Q8WWL2 714 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 BSNDQ8WZ55 320 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 CCDC47Q96A33 483 aaKnown RBP8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 FDXACB1Q9BRP7 624 aaPredicted RBP8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 NTPCRQ9BSD7 190 aaKnown RBP8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 GCOM2Q9BZD3 368 aaPredicted RBP8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 C2orf40Q9H1Z8 148 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 BLZF1Q9H2G9 400 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 ZHX3Q9H4I2 956 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 IFT122Q9HBG6 1241 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 OLFML3Q9NRN5 406 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 PANK4Q9NVE7 773 aa8.37□□□□□ -1.07
HMGXB3-204ENST00000513318 ADGRA3Q8IWK6 1321 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 PVALEFA0A1B0GWK0 134 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 CCDC169A6NNP5 214 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 SFI1A8K8P3 1242 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 C3orf80F5H4A9 247 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 INO80B-WBP1J3KQ70 363 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 K7ENM7 598 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 HRO43593 1189 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 RPS6KA5O75582 802 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 CXCL10P02778 98 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 RPN1P04843 607 aaKnown RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 PFKMP08237 780 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 SRGAP2CP0DJJ0 459 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 MAPTP10636 758 aaKnown RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 GHRP10912 638 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 DARSP14868 501 aaKnown RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 SYN1P17600 705 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 SFPQP23246 707 aaKnown RBP eCLIP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 EIF4BP23588 611 aaKnown RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 ITGB8P26012 769 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 CASP1P29466 404 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 NPTX2P47972 431 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 EFNA5P52803 228 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 NCKAP1LP55160 1127 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 PTENP60484 403 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 MLLT1Q03111 559 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 FPGSQ05932 587 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 EHHADHQ08426 723 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 PAK2Q13177 524 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 TSHZ1Q6ZSZ6 1077 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 MYCT1Q8N699 235 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 GPT2Q8TD30 523 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 TMEM40Q8WWA1 233 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 APBB2Q92870 758 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 KCNN1Q92952 543 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 HVCN1Q96D96 273 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 SCLYQ96I15 445 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 ZNF668Q96K58 619 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 PRIMPOLQ96LW4 560 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 LBHD1Q9BQE6 289 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 IFIH1Q9BYX4 1025 aaKnown RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 NUP62CLQ9H1M0 184 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 POLD4Q9HCU8 107 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 KMT5AQ9NQR1 393 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 EXOC1Q9NV70 894 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 ARHGAP28Q9P2N2 729 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 ZMYND8Q9ULU4 1186 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 MYO9BQ13459 2157 aa8.36□□□□□ -1.07
HMGXB3-204ENST00000513318 GPR182O15218 404 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 SLC16A4O15374 487 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 KLRC4O43908 158 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 NBNO60934 754 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 ERLIN2O94905 339 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 SMC2O95347 1197 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 CSF2RAP15509 400 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 MBTD1Q05BQ5 628 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 PPIGQ13427 754 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■■■□□ 14.9
HMGXB3-204ENST00000513318 PNOCQ13519 176 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 ALCAMQ13740 583 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 LPIN1Q14693 890 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 KCNB1Q14721 858 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 MAPK6Q16659 721 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 FAM187BQ17R55 369 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 KMT5BQ4FZB7 885 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 PLEKHG4Q58EX7 1191 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 HERC4Q5GLZ8 1057 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 FAM26FQ5R3K3 315 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 STXBP4Q6ZWJ1 553 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 HAUS6Q7Z4H7 955 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 FAM228AQ86W67 206 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 RPUSD2Q8IZ73 545 aaKnown RBP8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 TMEM161BQ8NDZ6 487 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms