RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 GAS7O60861 476 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 ZBED4O75132 1171 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 PGK1P00558 417 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 CFBP00751 764 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 TIMP1P01033 207 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 PGK2P07205 417 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 MCM3P25205 808 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 ITGB8P26012 769 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 CDK7P50613 346 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 OAZ1P54368 228 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 FAAP100Q0VG06 881 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 PPIGQ13427 754 aaKnown RBP eCLIP10.4□□□□□ -0.742e-12■■■□□ 18.2
MSH3-203ENST00000512531 ALCAMQ13740 583 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 FAM83BQ5T0W9 1011 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 RASIP1Q5U651 963 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 LRCH2Q5VUJ6 765 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 ZNF662Q6ZS27 426 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 NIPA1Q7RTP0 329 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 SYT2Q8N9I0 419 aaPredicted RBP10.4□□□□□ -0.74
MSH3-203ENST00000512531 PRPF38AQ8NAV1 312 aaKnown RBP10.4□□□□□ -0.74
MSH3-203ENST00000512531 PCSK9Q8NBP7 692 aaKnown RBP10.4□□□□□ -0.74
MSH3-203ENST00000512531 GOLGA5Q8TBA6 731 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 ANKRD7Q92527 254 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 CCDC43Q96MW1 224 aaKnown RBP10.4□□□□□ -0.74
MSH3-203ENST00000512531 NACC1Q96RE7 527 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 MED15Q96RN5 788 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 DNAJC7Q99615 494 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 SLF1Q9BQI6 1058 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 TEKT3Q9BXF9 490 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 NDST4Q9H3R1 872 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 STARD7Q9NQZ5 370 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 FBXO40Q9UH90 709 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 TBX21Q9UL17 535 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 DAAM1Q9Y4D1 1078 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 EPN1Q9Y6I3 576 aaPredicted RBP10.4□□□□□ -0.74
MSH3-203ENST00000512531 LOXHD1Q8IVV2 1947 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.75
MSH3-203ENST00000512531 B4DLN1 442 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 PQBP1O60828 265 aaKnown RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 FAM13AO94988 1023 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 NDUFA10O95299 355 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 EYA4O95677 639 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 SNAI1O95863 264 aaPredicted RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 TAL1P17542 331 aaPredicted RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 EPHB4P54760 987 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 KIF5AQ12840 1032 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 OCLNQ16625 522 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 TJAP1Q5JTD0 557 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 MFSD5Q6N075 450 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 KIAA0895Q8NCT3 520 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 ETNPPLQ8TBG4 499 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 ZNF507Q8TCN5 953 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 GOLGA1Q92805 767 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 RPGRIP1Q96KN7 1286 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 CCDC42Q96M95 316 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 GLT1D1Q96MS3 346 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 NAPGQ99747 312 aaPredicted RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 DUSP9Q99956 384 aaKnown RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 ARHGAP9Q9BRR9 750 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 CCDC94Q9BW85 323 aaPredicted RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 UPF3AQ9H1J1 476 aaKnown RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 ABHD16BQ9H3Z7 469 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 ZHX3Q9H4I2 956 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 SPC25Q9HBM1 224 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 CCPG1Q9ULG6 757 aa10.39□□□□□ -0.75
MSH3-203ENST00000512531 COL11A1P12107 1806 aaPredicted RBP10.39□□□□□ -0.75
MSH3-203ENST00000512531 PRUNE2Q8WUY3 3088 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 VCANP13611 3396 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 SPTBN5Q9NRC6 3674 aaKnown RBP10.38□□□□□ -0.75
MSH3-203ENST00000512531 EIF3DO15371 548 aaKnown RBP eCLIP10.38□□□□□ -0.75
MSH3-203ENST00000512531 ICAM1P05362 532 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 CCDC172P0C7W6 258 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 EPB41P11171 864 aaKnown RBP10.38□□□□□ -0.75
MSH3-203ENST00000512531 ABCD1P33897 745 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 GJA9P57773 515 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 COPS2P61201 443 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 CKAP4Q07065 602 aaKnown RBP10.38□□□□□ -0.75
MSH3-203ENST00000512531 PPP2R5CQ13362 524 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 KCNA10Q16322 511 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 WHAMMP3Q1A5X7 153 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 CEP55Q53EZ4 464 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 XRRA1Q6P2D8 792 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 TOGARAM2Q6ZUX3 1019 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 HS2ST1Q7LGA3 356 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 VPS36Q86VN1 386 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 CHST13Q8NET6 341 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 CRYGNQ8WXF5 182 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 SYN2Q92777 582 aaPredicted RBP10.38□□□□□ -0.75
MSH3-203ENST00000512531 ALS2CR12Q96Q35 445 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 RIT2Q99578 217 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 ZNF577Q9BSK1 485 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 TIPINQ9BVW5 301 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 ZNF576Q9H609 170 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 LZTFL1Q9NQ48 299 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 KCNG1Q9UIX4 513 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 ZNF215Q9UL58 517 aaPredicted RBP10.38□□□□□ -0.75
MSH3-203ENST00000512531 ODF2LQ9ULJ1 636 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms