RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CCDC84Q86UT8 332 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCDC33Q8N5R6 958 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 TMEM145Q8NBT3 493 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 RNF139Q8WU17 664 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 PHKBQ93100 1093 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 TMEM41AQ96HV5 264 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CABS1Q96KC9 395 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 NUCKS1Q9H1E3 243 aaKnown RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 DNAJB9Q9UBS3 223 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 MYO5CQ9NQX4 1742 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CROCC2H7BZ55 1655 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 SAMD9LQ8IVG5 1584 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 UBE2CO00762 179 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 DLX3O60479 287 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 RTN2O75298 545 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 TP53P04637 393 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 RPS2P15880 293 aaKnown RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 ALOX12P18054 663 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CES1P23141 567 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CIITAP33076 1130 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 ALDH9A1P49189 494 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 COASYQ13057 564 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 LAPTM5Q13571 262 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CTXN3Q4LDR2 81 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 STXBP5Q5T5C0 1151 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 PIWIL3Q7Z3Z3 882 aaKnown RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 IGSF22Q8N9C0 903 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 LRTOMTQ8WZ04 291 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 C14orf93Q9H972 538 aaKnown RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 PREBQ9HCU5 417 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 C5AR2Q9P296 337 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 ROCK1Q13464 1354 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 RIMBP3CA6NJZ7 1639 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 RIMBP3BA6NNM3 1639 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 RIMBP3Q9UFD9 1639 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARHGAP6O43182 974 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 DAPK3O43293 454 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 CLASP2O75122 1294 aaKnown RBP6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 ATE1O95260 518 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 PSAPP07602 524 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 PDHA1P08559 390 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 SNRNP70P08621 437 aaKnown RBP6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 TOP1P11387 765 aaKnown RBP6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 AP2B1P63010 937 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 SLC20A2Q08357 652 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 TLR1Q15399 786 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 PRSS53Q2L4Q9 553 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 C5orf22Q49AR2 442 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 DCLRE1AQ6PJP8 1040 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 GPR149Q86SP6 731 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZNF784Q8NCA9 323 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 LINS1Q8NG48 757 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 C17orf50Q8WW18 174 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 PTP4A1Q93096 173 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZPBPQ9BS86 351 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 NDST4Q9H3R1 872 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 LHX6Q9UPM6 363 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 SCAF8Q9UPN6 1271 aaKnown RBP6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 EXOC7Q9UPT5 735 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 PAXBP1Q9Y5B6 917 aa6.9□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARHGAP5Q13017 1502 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 GPR75-ASB3A0A0A6YYF3 556 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 POTEB3A0JP26 581 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 LRRC14BA6NHZ5 514 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 MEIS3P2A8K0S8 358 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 H3BML4 177 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 NPC1O15118 1278 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 TXNL1O43396 289 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZBTB14O43829 449 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 KERAO60938 352 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 CAMTA2O94983 1202 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 HTR1BP28222 390 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 INPP5BP32019 993 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 RNF144AP50876 292 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 SLC26A5P58743 744 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 KRT85P78386 507 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 ACTN3Q08043 901 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 TMEM266Q2M3C6 531 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 CAVIN4Q5BKX8 364 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 RBM20Q5T481 1227 aaKnown RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 SNX30Q5VWJ9 437 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 POTEBQ6S5H4 581 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 CCDC24Q8N4L8 307 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 DENND1AQ8TEH3 1009 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 FATE1Q969F0 183 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 ATG4CQ96DT6 458 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 MAGEB10Q96LZ2 347 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 PYM1Q9BRP8 204 aaKnown RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 CD244Q9BZW8 370 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 NOL6Q9H6R4 1146 aaKnown RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 VPS37BQ9H9H4 285 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 HOMER3Q9NSC5 361 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 DECR2Q9NUI1 292 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 PTBP2Q9UKA9 531 aaKnown RBP6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 ARHGEF5Q12774 1597 aa6.9□□□□□ -1.31
TRAPPC11-209ENST00000512476 PLCH2O75038 1416 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms