RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 HES2Q9Y543 173 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 TDRD15B5MCY1 1934 aaKnown RBP18.26■□□□□ 0.51
DDX41-213ENST00000512027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.26■□□□□ 0.51
DDX41-213ENST00000512027 ZNF623O75123 536 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 ZC3H11AO75152 810 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDX41-213ENST00000512027 OFD1O75665 1012 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 SKIP12755 728 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 LIG1P18858 919 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 ERVFC1P60507 584 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 RESTQ13127 1097 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 SF3A1Q15459 793 aaKnown RBP18.26■□□□□ 0.51
DDX41-213ENST00000512027 CDCA2Q69YH5 1023 aaPredicted RBP18.26■□□□□ 0.51
DDX41-213ENST00000512027 BRAPQ7Z569 592 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 MRPL10Q7Z7H8 261 aaKnown RBP18.26■□□□□ 0.51
DDX41-213ENST00000512027 RBM23Q86U06 439 aaKnown RBP18.26■□□□□ 0.51
DDX41-213ENST00000512027 RUSC1Q9BVN2 902 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 NFKBIZQ9BYH8 718 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 TBC1D13Q9NVG8 400 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 IPPQ9Y573 584 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 MYH11P35749 1972 aa18.26■□□□□ 0.51
DDX41-213ENST00000512027 MUC3AQ02505 3323 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 EYA4O95677 639 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 NOMO2Q5JPE7 1267 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 NOTUMQ6P988 496 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 GLB1LQ6UWU2 654 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 TMEM173Q86WV6 379 aaPredicted RBP18.25■□□□□ 0.51
DDX41-213ENST00000512027 PGBD4Q96DM1 585 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 APOL6Q9BWW8 343 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
DDX41-213ENST00000512027 CSRNP2Q9H175 543 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 NXF3Q9H4D5 531 aaKnown RBP18.25■□□□□ 0.51
DDX41-213ENST00000512027 RSAD1Q9HA92 442 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 TLR9Q9NR96 1032 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 DNAJB4Q9UDY4 337 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 DNM3Q9UQ16 869 aa18.25■□□□□ 0.51
DDX41-213ENST00000512027 NPTXRO95502 500 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 SSBP05455 408 aaKnown RBP eCLIP18.24■□□□□ 0.51
DDX41-213ENST00000512027 NCLP19338 710 aaKnown RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 PDCP20941 246 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 AXLP30530 894 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 NRIP1P48552 1158 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 BCAR1P56945 870 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 DLX2Q07687 328 aaPredicted RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 RAD51AP2Q09MP3 1159 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 CLUL1Q15846 466 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 PLPP4Q5VZY2 271 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 ZNF280BQ86YH2 543 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 ZBTB8OSQ8IWT0 167 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 DAW1Q8N136 415 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 SLC39A11Q8N1S5 342 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 MICAL1Q8TDZ2 1067 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 LRRC15Q8TF66 581 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 BCL7CQ8WUZ0 217 aaPredicted RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 SYMPKQ92797 1274 aaKnown RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 PABPC5Q96DU9 382 aaKnown RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 INTS4Q96HW7 963 aaKnown RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 UHRF1Q96T88 793 aaPredicted RBP18.24■□□□□ 0.51
DDX41-213ENST00000512027 NRDE2Q9H7Z3 1164 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 CLIC4Q9Y696 253 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 STK24Q9Y6E0 443 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 C5orf42Q9H799 3197 aa18.24■□□□□ 0.51
DDX41-213ENST00000512027 PER2O15055 1255 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 HIP1RO75146 1068 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 DDHD2O94830 711 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 POMCP01189 267 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 PRKCBP05771 671 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 ITGA4P13612 1032 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 LTBRP36941 435 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 NAMPTP43490 491 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
DDX41-213ENST00000512027 RNASELQ05823 741 aaKnown RBP18.23■□□□□ 0.51
DDX41-213ENST00000512027 COL19A1Q14993 1142 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 CSPP1Q1MSJ5 1256 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 HYIQ5T013 277 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 ARL6IP4Q66PJ3 421 aaKnown RBP18.23■□□□□ 0.51
DDX41-213ENST00000512027 RINT1Q6NUQ1 792 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 CABP7Q86V35 215 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 DEPTORQ8TB45 409 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 MRPS27Q92552 414 aaKnown RBP18.23■□□□□ 0.51
DDX41-213ENST00000512027 CCDC113Q9H0I3 377 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 FZD8Q9H461 694 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 PRMT7Q9NVM4 692 aaPredicted RBP18.23■□□□□ 0.51
DDX41-213ENST00000512027 SPG21Q9NZD8 308 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 CNTNAP2Q9UHC6 1331 aa18.23■□□□□ 0.51
DDX41-213ENST00000512027 NCOR1O75376 2440 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 FSCN2O14926 492 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 TBX10O75333 385 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 AKAP5P24588 427 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 MLH1P40692 756 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 SLC11A1P49279 550 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 PLCB3Q01970 1234 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 CEBPZQ03701 1054 aaKnown RBP18.22■□□□□ 0.51
DDX41-213ENST00000512027 UBE3AQ05086 875 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 NCBP1Q09161 790 aaKnown RBP18.22■□□□□ 0.51
DDX41-213ENST00000512027 MAPK7Q13164 816 aa18.22■□□□□ 0.51
DDX41-213ENST00000512027 PCBP1Q15365 356 aaKnown RBP eCLIP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms