RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-213ENST00000511732 GLRA2P23416 452 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 TECP42680 631 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 CAPSQ13938 189 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 MXD4Q14582 209 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-213ENST00000511732 SMC1AQ14683 1233 aaKnown RBP17.04■□□□□ 0.32
COL1A1-213ENST00000511732 SAFBQ15424 915 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL1A1-213ENST00000511732 ZNF174Q15697 407 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 CATSPER3Q86XQ3 398 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 IFNLR1Q8IU57 520 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-213ENST00000511732 VPS52Q8N1B4 723 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 RSPH1Q8WYR4 309 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 TMEM169Q96HH4 297 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 IGSF21Q96ID5 467 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 CPB2Q96IY4 423 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 APOL5Q9BWW9 433 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 EIF2AQ9BY44 585 aaKnown RBP17.04■□□□□ 0.32
COL1A1-213ENST00000511732 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 RSAD1Q9HA92 442 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 CDH22Q9UJ99 828 aa17.04■□□□□ 0.32
COL1A1-213ENST00000511732 FSD2A1L4K1 749 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 PRR33A8MZF0 331 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 LOC730098B7Z3J9 87 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
COL1A1-213ENST00000511732 SLC11A1P49279 550 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 MBTD1Q05BQ5 628 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 POU5F1BQ06416 359 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 AMHR2Q16671 573 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 AUTS2Q8WXX7 1259 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-213ENST00000511732 GPRC5CQ9NQ84 441 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 HCFC2Q9Y5Z7 792 aa17.03■□□□□ 0.32
COL1A1-213ENST00000511732 INO80B-WBP1J3KQ70 363 aa17.02■□□□□ 0.32
COL1A1-213ENST00000511732 USO1O60763 962 aaKnown RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 ERLIN2O94905 339 aa17.02■□□□□ 0.32
COL1A1-213ENST00000511732 CXCL14O95715 111 aa17.02■□□□□ 0.32
COL1A1-213ENST00000511732 POMCP01189 267 aa17.02■□□□□ 0.32
COL1A1-213ENST00000511732 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 RNASELQ05823 741 aaKnown RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 HERC4Q5GLZ8 1057 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 MAEAQ7L5Y9 396 aa17.02■□□□□ 0.32
COL1A1-213ENST00000511732 DDX53Q86TM3 631 aaKnown RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 PHF7Q9BWX1 381 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-213ENST00000511732 HES2Q9Y543 173 aa17.02■□□□□ 0.32
COL1A1-213ENST00000511732 IPPQ9Y573 584 aa17.02■□□□□ 0.32
COL1A1-213ENST00000511732 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 CTSAP10619 480 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 ARF4P18085 180 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-213ENST00000511732 AXLP30530 894 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 CA8P35219 290 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
COL1A1-213ENST00000511732 TFDP1Q14186 410 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 NBR1Q14596 966 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 CBX2Q14781 532 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-213ENST00000511732 PCBP1Q15365 356 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL1A1-213ENST00000511732 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 POTEGQ6S5H5 508 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 CDR2LQ86X02 465 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-213ENST00000511732 C4orf32Q8N8J7 132 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 URGCPQ8TCY9 931 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 RPGRIP1Q96KN7 1286 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 POLR3CQ9BUI4 534 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-213ENST00000511732 NFKBIZQ9BYH8 718 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 TUFT1Q9NNX1 390 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 MIOSQ9NXC5 875 aa17.01■□□□□ 0.31
COL1A1-213ENST00000511732 CNTNAP2Q9UHC6 1331 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17■□□□□ 0.31
COL1A1-213ENST00000511732 B4GALT5O43286 388 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 SRGAP2BP0DMP2 458 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 ITGA4P13612 1032 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 RBM25P49756 843 aaKnown RBP17■□□□□ 0.31
COL1A1-213ENST00000511732 ECM1Q16610 540 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 TTC38Q5R3I4 469 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 NOSTRINQ8IVI9 506 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 CNNM3Q8NE01 707 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 CASP10Q92851 521 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 CCDC43Q96MW1 224 aaKnown RBP17■□□□□ 0.31
COL1A1-213ENST00000511732 GAD1Q99259 594 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 CSRNP2Q9H175 543 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
COL1A1-213ENST00000511732 DBR1Q9UK59 544 aaKnown RBP17■□□□□ 0.31
COL1A1-213ENST00000511732 IRAK3Q9Y616 596 aa17■□□□□ 0.31
COL1A1-213ENST00000511732 TDRD15B5MCY1 1934 aaKnown RBP17■□□□□ 0.31
COL1A1-213ENST00000511732 NRP1O14786 923 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 INPPL1O15357 1258 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 HOXB8P17481 243 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-213ENST00000511732 RPA1P27694 616 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 MLH1P40692 756 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 TOB1P50616 345 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-213ENST00000511732 ORC2Q13416 577 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-213ENST00000511732 KANK3Q6NY19 840 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 FAM184AQ8NB25 1140 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms