RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GJD3Q8N144 294 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 MSLNLQ96KJ4 702 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 TBC1D32Q96NH3 1257 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 CDCA3Q99618 268 aaPredicted RBP25.51■■□□□ 1.67
SNF8-209ENST00000510558 NFKBIZQ9BYH8 718 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 GPRC5CQ9NQ84 441 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 CLEC1BQ9P126 229 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 PCDHB6Q9Y5E3 794 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 SSTR3P32745 418 aaPredicted RBP25.5■■□□□ 1.67
SNF8-209ENST00000510558 RNASELQ05823 741 aaKnown RBP25.5■■□□□ 1.67
SNF8-209ENST00000510558 MCPH1Q8NEM0 835 aa25.5■■□□□ 1.67
SNF8-209ENST00000510558 KHSRPQ92945 711 aaKnown RBP eCLIP25.5■■□□□ 1.678e-7■□□□□ 9
SNF8-209ENST00000510558 CPB2Q96IY4 423 aa25.5■■□□□ 1.67
SNF8-209ENST00000510558 NRDE2Q9H7Z3 1164 aa25.5■■□□□ 1.67
SNF8-209ENST00000510558 RSAD1Q9HA92 442 aa25.5■■□□□ 1.67
SNF8-209ENST00000510558 NGRNQ9NPE2 291 aaKnown RBP25.5■■□□□ 1.67
SNF8-209ENST00000510558 PRKAG3Q9UGI9 489 aa25.5■■□□□ 1.67
SNF8-209ENST00000510558 BARX2Q9UMQ3 279 aaPredicted RBP25.5■■□□□ 1.67
SNF8-209ENST00000510558 CNTNAP2Q9UHC6 1331 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 FSD2A1L4K1 749 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 NCLP19338 710 aaKnown RBP25.49■■□□□ 1.67
SNF8-209ENST00000510558 MUTP22033 750 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 MCM2P49736 904 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 NCBP1Q09161 790 aaKnown RBP25.49■■□□□ 1.67
SNF8-209ENST00000510558 PTGDRQ13258 359 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 SMAD2Q15796 467 aaKnown RBP25.49■■□□□ 1.67
SNF8-209ENST00000510558 AMHR2Q16671 573 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 NOTUMQ6P988 496 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 TMC7Q7Z402 723 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 URGCPQ8TCY9 931 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 CCDC51Q96ER9 411 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 TMEM169Q96HH4 297 aa25.49■■□□□ 1.67
SNF8-209ENST00000510558 ARHGEF35A5YM69 484 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 CARNS1A5YM72 827 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 HIDE1A8MVS5 230 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 CCT6AP40227 531 aaKnown RBP25.48■■□□□ 1.67
SNF8-209ENST00000510558 ZP2Q05996 745 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 MCTP1Q6DN14 999 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 SMG8Q8ND04 991 aaKnown RBP25.48■■□□□ 1.67
SNF8-209ENST00000510558 CNNM3Q8NE01 707 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 EIF2AQ9BY44 585 aaKnown RBP25.48■■□□□ 1.67
SNF8-209ENST00000510558 GBP3Q9H0R5 595 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 EPHX3Q9H6B9 360 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 LRWD1Q9UFC0 647 aa25.48■■□□□ 1.67
SNF8-209ENST00000510558 LRRIQ4A6NIV6 560 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 EYA4O95677 639 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 GALTP07902 379 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 ARF4P18085 180 aaPredicted RBP25.47■■□□□ 1.67
SNF8-209ENST00000510558 GJB2P29033 226 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 RBM10P98175 930 aaKnown RBP25.47■■□□□ 1.67
SNF8-209ENST00000510558 COASYQ13057 564 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 ECM1Q16610 540 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 PADI6Q6TGC4 694 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 TMEM173Q86WV6 379 aaPredicted RBP25.47■■□□□ 1.67
SNF8-209ENST00000510558 ADHFE1Q8IWW8 467 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 SMRP1Q8NCR6 262 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 VN1R2Q8NFZ6 395 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 CSRNP2Q9H175 543 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 DNAJB4Q9UDY4 337 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 IPPQ9Y573 584 aa25.47■■□□□ 1.67
SNF8-209ENST00000510558 TDRD15B5MCY1 1934 aaKnown RBP25.47■■□□□ 1.67
SNF8-209ENST00000510558 B4GALT3O60512 393 aa25.46■■□□□ 1.67
SNF8-209ENST00000510558 ITGA4P13612 1032 aa25.46■■□□□ 1.67
SNF8-209ENST00000510558 AFF1P51825 1210 aaKnown RBP25.46■■□□□ 1.67
SNF8-209ENST00000510558 PDIA5Q14554 519 aa25.46■■□□□ 1.67
SNF8-209ENST00000510558 SMC1AQ14683 1233 aaKnown RBP25.46■■□□□ 1.67
SNF8-209ENST00000510558 ZNF280BQ86YH2 543 aa25.46■■□□□ 1.67
SNF8-209ENST00000510558 IGSF22Q8N9C0 903 aa25.46■■□□□ 1.67
SNF8-209ENST00000510558 C1QTNF1Q9BXJ1 281 aa25.46■■□□□ 1.67
SNF8-209ENST00000510558 RAB34Q9BZG1 259 aa25.46■■□□□ 1.67
SNF8-209ENST00000510558 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.46■■□□□ 1.67
SNF8-209ENST00000510558 LAD1O00515 517 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 B4GALT5O43286 388 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 CYP11B2P19099 503 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 SLC11A1P49279 550 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 SNX29Q8TEQ0 813 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 IGSF21Q96ID5 467 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 UBN1Q9NPG3 1134 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 KANSL3Q9P2N6 904 aa25.45■■□□□ 1.66
SNF8-209ENST00000510558 C2orf71A6NGG8 1288 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 C19orf67A6NJJ6 358 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 H3BQV1 296 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 DDHD2O94830 711 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 KCNC3Q14003 757 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 RILPL1Q5EBL4 403 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 CDCA2Q69YH5 1023 aaPredicted RBP25.44■■□□□ 1.66
SNF8-209ENST00000510558 ZBTB8OSQ8IWT0 167 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 VPS52Q8N1B4 723 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 MRPL43Q8N983 215 aaKnown RBP25.44■■□□□ 1.66
SNF8-209ENST00000510558 BCL7CQ8WUZ0 217 aaPredicted RBP25.44■■□□□ 1.66
SNF8-209ENST00000510558 TRIM6Q9C030 488 aaPredicted RBP25.44■■□□□ 1.66
SNF8-209ENST00000510558 KIAA1024Q9UPX6 916 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 SMC3Q9UQE7 1217 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 HES2Q9Y543 173 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 STK24Q9Y6E0 443 aa25.44■■□□□ 1.66
SNF8-209ENST00000510558 POMCP01189 267 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 SRGAP2BP0DMP2 458 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 PRPHP41219 470 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 BMS1Q14692 1282 aaKnown RBP25.43■■□□□ 1.66
SNF8-209ENST00000510558 TMEM184AQ6ZMB5 413 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms