RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PRUNE2Q8WUY3 3088 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 LOXHD1Q8IVV2 1947 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 SFI1A8K8P3 1242 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 SPTLC2O15270 562 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 INPPL1O15357 1258 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 ERLIN2O94905 339 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 EDN1P05305 212 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 CTNNB1P35222 781 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 NPTX2P47972 431 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 EFNA5P52803 228 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 GPM6BQ13491 265 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 AXDND1Q5T1B0 1012 aaPredicted RBP12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 FOXD4L5Q5VV16 416 aaPredicted RBP12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 NOTUMQ6P988 496 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 TAS1R3Q7RTX0 852 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 ZBTB8OSQ8IWT0 167 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 DEPTORQ8TB45 409 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 FOXD4L4Q8WXT5 416 aaPredicted RBP12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 RAD54LQ92698 747 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 LPPQ93052 612 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 DRC1Q96MC2 740 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 KIFC3Q9BVG8 833 aa12.98□□□□□ -0.33
HMGXB3-203ENST00000510472 TRANK1O15050 2925 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 CNTNAP2Q9UHC6 1331 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 A0A087X0B3 334 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 GRM6O15303 877 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 ITGB1P05556 798 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 PLS3P13797 630 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 ZNF131P52739 623 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 PEX3P56589 373 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 MCM6Q14566 821 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 MAPK6Q16659 721 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 NT5DC1Q5TFE4 455 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 KLHL23Q8NBE8 558 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 RNF169Q8NCN4 708 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 CNNM3Q8NE01 707 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 SPPL3Q8TCT6 385 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 HELQQ8TDG4 1101 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 PGBD4Q96DM1 585 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 MRPL38Q96DV4 380 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 C11orf84Q9BUA3 381 aaPredicted RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 RCOR1Q9UKL0 485 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 USP20Q9Y2K6 914 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 RBM19Q9Y4C8 960 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 IPPQ9Y573 584 aa12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 PRRC2BQ5JSZ5 2229 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-203ENST00000510472 NPHP3-ACAD11A0A0J9YXS1 232 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 PRKCBP05771 671 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 DNAJB1P25685 340 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 GIT2Q14161 759 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 STK38Q15208 465 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 LONRF3Q496Y0 759 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 NOMO2Q5JPE7 1267 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 SLC27A1Q6PCB7 646 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 GLB1LQ6UWU2 654 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 LRRC43Q8N309 656 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 TMEM161BQ8NDZ6 487 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 GSTCDQ8NEC7 633 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 LARP4BQ92615 738 aaKnown RBP12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 LMAN2LQ9H0V9 348 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 PDZD7Q9H5P4 517 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 PTPRHQ9HD43 1115 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 STK17AQ9UEE5 414 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 KCNG1Q9UIX4 513 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 ODF2LQ9ULJ1 636 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 ARID2Q68CP9 1835 aa12.96□□□□□ -0.33
HMGXB3-203ENST00000510472 CCDC169A6NNP5 214 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 K7ERI5 159 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 CUTAO60888 179 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 LAG3P18627 525 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 PLCB3Q01970 1234 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 RAD51AP2Q09MP3 1159 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 DMP1Q13316 513 aaPredicted RBP12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 PRPF4BQ13523 1007 aaKnown RBP12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 COL19A1Q14993 1142 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 CCDC85BQ15834 202 aaPredicted RBP12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 RRAGBQ5VZM2 374 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 EEF1DP3Q658K8 133 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 SHC4Q6S5L8 630 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 KCNT2Q6UVM3 1135 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 GPBP1Q86WP2 473 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 CDR2LQ86X02 465 aaPredicted RBP12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 FIZ1Q96SL8 496 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 REEP2Q9BRK0 252 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 MRPL9Q9BYD2 267 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms