RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	FZD8	Q9H461	694 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	MINDY3	Q9H8M7	445 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	GINS2	Q9Y248	185 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	ATP11B	Q9Y2G3	1177 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	MICAL3	Q7RTP6	2002 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	PDCD11	Q14690	1871 aa	Known RBP	13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	ZMYM2	Q9UBW7	1377 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	BICDL2	A1A5D9	508 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	ACKR2	O00590	384 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	PDXK	O00764	312 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	PIGR	P01833	764 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	PRKCB	P05771	671 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	CTSH	P09668	335 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	SNRPF	P62306	86 aa	Known RBP	13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	ZNF618	Q5T7W0	954 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	FOXR2	Q6PJQ5	311 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	PPP4R3CP	Q6ZMV5	832 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	SYCP3	Q8IZU3	236 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	NELFB	Q8WX92	580 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	GBP3	Q9H0R5	595 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	SEMA6B	Q9H3T3	888 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	TYW1	Q9NV66	732 aa	Known RBP	13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	CGN	Q9P2M7	1197 aa	Known RBP	13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	RWDD2A	Q9UIY3	292 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	CTNND2	Q9UQB3	1225 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	SQOR	Q9Y6N5	450 aa		13.13	□□□□□ -0.31
RACK1-223	ENST00000510199	RALGAPA2	Q2PPJ7	1873 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	TGFB1I1	O43294	461 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	CALU	O43852	315 aa	Predicted RBP	13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	CSDE1	O75534	798 aa	Known RBP	13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	CLTB	P09497	229 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	IQCF3	P0C7M6	154 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	SELP	P16109	830 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	SFPQ	P23246	707 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	ZNF165	P49910	485 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	LRRC63	Q05C16	580 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	PRPF4B	Q13523	1007 aa	Known RBP	13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	AMHR2	Q16671	573 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	ZCWPW2	Q504Y3	356 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	TRAF7	Q6Q0C0	670 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	ZPBP2	Q6X784	338 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	HS2ST1	Q7LGA3	356 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	USP38	Q8NB14	1042 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	GOLGA5	Q8TBA6	731 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	TMEM40	Q8WWA1	233 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	TSG101	Q99816	390 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	NOC4L	Q9BVI4	516 aa	Known RBP	13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	MRPL4	Q9BYD3	311 aa	Known RBP	13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	TBX21	Q9UL17	535 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	TRAF3IP3	Q9Y228	551 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	CNTNAP2	Q9UHC6	1331 aa		13.12	□□□□□ -0.31
RACK1-223	ENST00000510199	LTBP2	Q14767	1821 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	TRIM49B	A6NDI0	452 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	HNRNPDL	O14979	420 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	RPS6KA5	O75582	802 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	ERLIN2	O94905	339 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	PARN	O95453	639 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	EDN1	P05305	212 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	AXL	P30530	894 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	LIG4	P49917	911 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	PMS1	P54277	932 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	STX17	P56962	302 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	NCBP1	Q09161	790 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	NFIL3	Q16649	462 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	EDRF1	Q3B7T1	1238 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	FBXO47	Q5MNV8	452 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	ANKRD40	Q6AI12	368 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	TTI2	Q6NXR4	508 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	LRRC8D	Q7L1W4	858 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	CATSPER4	Q7RTX7	472 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	ENOX1	Q8TC92	643 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	FAM200A	Q8TCP9	573 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	TMEM174	Q8WUU8	243 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	BICD1	Q96G01	975 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	MED15	Q96RN5	788 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	ACO2	Q99798	780 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	HIPK3	Q9H422	1215 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	TMEM39A	Q9NV64	488 aa		13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	NOC2L	Q9Y3T9	749 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-223	ENST00000510199	CCDC85C	A6NKD9	419 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	SMTNL1	A8MU46	457 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	ANKRD63	C9JTQ0	380 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	IKBKB	O14920	756 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	GPR182	O15218	404 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	TSPAN1	O60635	241 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	ARF4	P18085	180 aa	Predicted RBP	13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	GART	P22102	1010 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	FGFR4	P22455	802 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	IQCB1	Q15051	598 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	ATF7IP2	Q5U623	682 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	SLFN12L	Q6IEE8	588 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	SLC39A4	Q6P5W5	647 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	TSHZ1	Q6ZSZ6	1077 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	FAM228A	Q86W67	206 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	C12orf56	Q8IXR9	622 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	TARS2	Q9BW92	718 aa	Known RBP	13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	IKZF4	Q9H2S9	585 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	CBX8	Q9HC52	389 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	AGPAT3	Q9NRZ7	376 aa		13.1	□□□□□ -0.31
RACK1-223	ENST00000510199	TNFSF13B	Q9Y275	285 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms