RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 HLA-CQ95604 372 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 CCDC51Q96ER9 411 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 RUSC1Q9BVN2 902 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 EIF2AQ9BY44 585 aaKnown RBP17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 NT5C3AQ9H0P0 336 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 ARID2Q68CP9 1835 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 TTLL13PA6NNM8 815 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 ACKR2O00590 384 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 FGF18O76093 207 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 BMP1P13497 986 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 LAG3P18627 525 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 LONP1P36776 959 aaKnown RBP17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 MAPK7Q13164 816 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 COL19A1Q14993 1142 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 PPP2R5AQ15172 486 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 CSPP1Q1MSJ5 1256 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 NOMO2Q5JPE7 1267 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 HSCBQ8IWL3 235 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 LRRC43Q8N309 656 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 LRRC15Q8TF66 581 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 RSPH1Q8WYR4 309 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 IFT74Q96LB3 600 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 PRIMPOLQ96LW4 560 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 NTPCRQ9BSD7 190 aaKnown RBP17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 C2orf40Q9H1Z8 148 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 NSUN3Q9H649 340 aaKnown RBP17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 PRMT7Q9NVM4 692 aaPredicted RBP17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 IPPQ9Y573 584 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 SRPRBQ9Y5M8 271 aaKnown RBP17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 NLRC5Q86WI3 1866 aa17.84■□□□□ 0.45
PDLIM5-212ENST00000509333 SFI1A8K8P3 1242 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 DLL1O00548 723 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 PLA2G4BP0C869 781 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 MARCKSP29966 332 aaPredicted RBP17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 IRS1P35568 1242 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 SLC12A3P55017 1021 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 ERVFC1P60507 584 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 UBE3AQ05086 875 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 TIGD5Q53EQ6 642 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 ARSHQ5FYA8 562 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 USP49Q70CQ1 688 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 CDR2LQ86X02 465 aaPredicted RBP17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 ZBTB8OSQ8IWT0 167 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 ZNF558Q96NG5 402 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 USP28Q96RU2 1077 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 COL25A1Q9BXS0 654 aaPredicted RBP17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 CCSER1Q9C0I3 900 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 CCDC113Q9H0I3 377 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 NRDE2Q9H7Z3 1164 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 TBC1D13Q9NVG8 400 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 MIOSQ9NXC5 875 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 FBXO2Q9UK22 296 aaPredicted RBP17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 USP20Q9Y2K6 914 aa17.83■□□□□ 0.44
PDLIM5-212ENST00000509333 TTC28Q96AY4 2481 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 RALGAPA2Q2PPJ7 1873 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 HIP1RO75146 1068 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 GALTP07902 379 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 ITGA4P13612 1032 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 GUCY2CP25092 1073 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 PBX3P40426 434 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 NPTX2P47972 431 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 EFNA5P52803 228 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 PEX3P56589 373 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 BCAR1P56945 870 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 CEBPZQ03701 1054 aaKnown RBP17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 SLC39A14Q15043 492 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 MAPK6Q16659 721 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 TJAP1Q5JTD0 557 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 NT5DC1Q5TFE4 455 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 ZNF280BQ86YH2 543 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 THNSL1Q8IYQ7 743 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 DEPTORQ8TB45 409 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 EPSTI1Q96J88 318 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 MRPL9Q9BYD2 267 aaKnown RBP17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 UBN1Q9NPG3 1134 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 BLOC1S4Q9NUP1 217 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 SPG21Q9NZD8 308 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 KANSL3Q9P2N6 904 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 LZTS1Q9Y250 596 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 HES2Q9Y543 173 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 MORC2Q9Y6X9 1032 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 CUL9Q8IWT3 2517 aa17.82■□□□□ 0.44
PDLIM5-212ENST00000509333 CNTNAP2Q9UHC6 1331 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 K7ERI5 159 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 INPPL1O15357 1258 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 NCK2O43639 380 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 DDHD2O94830 711 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 EDN1P05305 212 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 ALDH7A1P49419 539 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 HYAL1Q12794 435 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 CTC1Q2NKJ3 1217 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 SPECC1Q5M775 1068 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 SLC27A1Q6PCB7 646 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 SLC39A11Q8N1S5 342 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 MRPS27Q92552 414 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 CALML4Q96GE6 196 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 CLIC6Q96NY7 704 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms