RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ANKFY1Q9P2R3 1169 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 APEX2Q9UBZ4 518 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 FOXN3O00409 490 aaPredicted RBP16.17■□□□□ 0.18
PHF3-209ENST00000509330 STAT1P42224 750 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 MXI1P50539 228 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 JAM2P57087 298 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 PPP2R5AQ15172 486 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 NFIL3Q16649 462 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 TAS1R3Q7RTX0 852 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 SLC9A9Q8IVB4 645 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 MAP4K3Q8IVH8 894 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 TRAPPC12Q8WVT3 735 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 NOX5Q96PH1 765 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 ANKZF1Q9H8Y5 726 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 IGSF9BQ9UPX0 1349 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 CALCAP01258 141 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 ACOT2P49753 483 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 WHAMMP3Q1A5X7 153 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 GPAT2Q6NUI2 795 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 PALB2Q86YC2 1186 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 PPM1KQ8N3J5 372 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 LRRC71Q8N4P6 559 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 PI4K2AQ9BTU6 479 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
PHF3-209ENST00000509330 NAGPAQ9UK23 515 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 PAPPA2Q9BXP8 1791 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 NOP56O00567 594 aaKnown RBP16.17■□□□□ 0.18
PHF3-209ENST00000509330 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.18
PHF3-209ENST00000509330 STAM2O75886 525 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 STAT5BP51692 787 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 ALCAMQ13740 583 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 TAF3Q5VWG9 929 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 MCPH1Q8NEM0 835 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 SLC7A3Q8WY07 619 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 MS4A14Q96JA4 679 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 L3MBTL3Q96JM7 780 aaPredicted RBP16.17■□□□□ 0.18
PHF3-209ENST00000509330 FGD4Q96M96 766 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 PPP1R16BQ96T49 567 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 GPR88Q9GZN0 384 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 EXOC7Q9UPT5 735 aa16.17■□□□□ 0.18
PHF3-209ENST00000509330 SOX5P35711 763 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 PAPD7Q5XG87 772 aaKnown RBP16.16■□□□□ 0.18
PHF3-209ENST00000509330 TMCO3Q6UWJ1 677 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 GPR161Q8N6U8 529 aaKnown RBP16.16■□□□□ 0.18
PHF3-209ENST00000509330 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 RABGGTAQ92696 567 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 KCNH4Q9UQ05 1017 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 MAFBQ9Y5Q3 323 aaPredicted RBP16.16■□□□□ 0.18
PHF3-209ENST00000509330 BRCA2P51587 3418 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 DKC1O60832 514 aaKnown RBP eCLIP16.16■□□□□ 0.18
PHF3-209ENST00000509330 GJB1P08034 283 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 OSBPP22059 807 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 LIG4P49917 911 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 LNX1Q8TBB1 728 aaPredicted RBP16.16■□□□□ 0.18
PHF3-209ENST00000509330 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 JRKLQ9Y4A0 524 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 HYOU1Q9Y4L1 999 aa16.16■□□□□ 0.18
PHF3-209ENST00000509330 GTPBP10A4D1E9 387 aaKnown RBP16.15■□□□□ 0.18
PHF3-209ENST00000509330 LRRIQ3A6PVS8 624 aaPredicted RBP16.15■□□□□ 0.18
PHF3-209ENST00000509330 GLRA2P23416 452 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 ERVK-9P63128 1117 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 ZBTB41Q5SVQ8 909 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 ZNF662Q6ZS27 426 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 LMO3Q8TAP4 145 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 ARGLU1Q9NWB6 273 aaPredicted RBP16.15■□□□□ 0.18
PHF3-209ENST00000509330 TAS2R14Q9NYV8 317 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 EDN1P05305 212 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 ICAM3P32942 547 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 WNT7BP56706 349 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 DEPTORQ8TB45 409 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 TAS1R2Q8TE23 839 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 TIPINQ9BVW5 301 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 TARS2Q9BW92 718 aaKnown RBP16.15■□□□□ 0.18
PHF3-209ENST00000509330 STK33Q9BYT3 514 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 SNX12Q9UMY4 172 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 DNAH12Q6ZR08 3092 aa16.15■□□□□ 0.18
PHF3-209ENST00000509330 MYH9P35579 1960 aaKnown RBP16.15■□□□□ 0.18
PHF3-209ENST00000509330 TTLL13PA6NNM8 815 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 SOCS7O14512 581 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 SRGAP2CP0DJJ0 459 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 EDNRBP24530 442 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 SPATA33Q96N06 139 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 OSBPL9Q96SU4 736 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 AZI2Q9H6S1 392 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 PRDM10Q9NQV6 1147 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 ST7Q9NRC1 585 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 MCM3APO60318 1980 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 PJA2O43164 708 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 IGBP1P78318 339 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 CETN1Q12798 172 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 SNAPC2Q13487 334 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 FASTKD5Q7L8L6 764 aaKnown RBP16.14■□□□□ 0.17
PHF3-209ENST00000509330 CDR2LQ86X02 465 aaPredicted RBP16.14■□□□□ 0.17
PHF3-209ENST00000509330 ZC3H15Q8WU90 426 aaKnown RBP16.14■□□□□ 0.17
PHF3-209ENST00000509330 DHX38Q92620 1227 aaKnown RBP16.14■□□□□ 0.17
PHF3-209ENST00000509330 GDAP1L1Q96MZ0 367 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 TLR10Q9BXR5 811 aa16.14■□□□□ 0.17
PHF3-209ENST00000509330 ST6GALNAC4Q9H4F1 302 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms