RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 STXBP4Q6ZWJ1 553 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 FAM178BQ8IXR5 827 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 CCDC65Q8IXS2 484 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 ABI1Q8IZP0 508 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 DDX12PQ92771 950 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 KCNN1Q92952 543 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 TIFAQ96CG3 184 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 PGBD4Q96DM1 585 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 NTPCRQ9BSD7 190 aaKnown RBP10.07□□□□□ -0.8
NUP54-207ENST00000508583 MRPL4Q9BYD3 311 aaKnown RBP10.07□□□□□ -0.8
NUP54-207ENST00000508583 ZHX3Q9H4I2 956 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 SLC28A3Q9HAS3 691 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 UBN1Q9NPG3 1134 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 KBTBD4Q9NVX7 518 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 ARHGAP28Q9P2N2 729 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 HOOK1Q9UJC3 728 aaKnown RBP10.07□□□□□ -0.8
NUP54-207ENST00000508583 RWDD3Q9Y3V2 267 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 CNTNAP2Q9UHC6 1331 aa10.07□□□□□ -0.8
NUP54-207ENST00000508583 FAM237AA0A1B0GTK4 181 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 C9IYK1 514 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 TSPAN1O60635 241 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 CSDE1O75534 798 aaKnown RBP10.06□□□□□ -0.8
NUP54-207ENST00000508583 UPP2O95045 317 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 SLFN14P0C7P3 912 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
NUP54-207ENST00000508583 FAM189BP81408 668 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 MAPK7Q13164 816 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 GIT2Q14161 759 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 DSC3Q14574 896 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 E2F4Q16254 413 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 ARSHQ5FYA8 562 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 CNNM4Q6P4Q7 775 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 SLC27A1Q6PCB7 646 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 DAW1Q8N136 415 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 CCDC47Q96A33 483 aaKnown RBP10.06□□□□□ -0.8
NUP54-207ENST00000508583 HVCN1Q96D96 273 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 LRCH3Q96II8 777 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 SAMD11Q96NU1 681 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
NUP54-207ENST00000508583 PBX4Q9BYU1 374 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 FZD8Q9H461 694 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 MINDY3Q9H8M7 445 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 FAM105AQ9NUU6 356 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 COL4A6Q14031 1691 aa10.06□□□□□ -0.8
NUP54-207ENST00000508583 ZMYM2Q9UBW7 1377 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 SZT2Q5T011 3432 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 A0A087X0B3 334 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 A0A1B0GUA9 196 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 A0A1B0GVL5 298 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 MYMKA6NI61 221 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 K7ENM7 598 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 SLC16A4O15374 487 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 TRAK2O60296 914 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 ZNF623O75123 536 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 IDEP14735 1019 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 FGFR4P22455 802 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 HTRA4P83105 476 aaPredicted RBP10.05□□□□□ -0.8
NUP54-207ENST00000508583 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 FAM117BQ6P1L5 589 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 GLB1LQ6UWU2 654 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 ZPBP2Q6X784 338 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 DYMQ7RTS9 669 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 ECHDC2Q86YB7 292 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 CMTR2Q8IYT2 770 aaKnown RBP10.05□□□□□ -0.8
NUP54-207ENST00000508583 LINC01599Q8WXQ3 324 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 BSNDQ8WZ55 320 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 BICD1Q96G01 975 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 GBP4Q96PP9 640 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 ST6GALNAC4Q9H4F1 302 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 MRPL44Q9H9J2 332 aaKnown RBP10.05□□□□□ -0.8
NUP54-207ENST00000508583 GDPD2Q9HCC8 539 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 AAASQ9NRG9 546 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 PANK4Q9NVE7 773 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 HPSEQ9Y251 543 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 PCDHB2Q9Y5E7 798 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 ADGRA3Q8IWK6 1321 aa10.05□□□□□ -0.8
NUP54-207ENST00000508583 NPHP3-ACAD11A0A0J9YXS1 232 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 PVALEFA0A1B0GWK0 134 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 FRMD3A2A2Y4 597 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 GRXCR1A8MXD5 290 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 GOLGA6L22H0YM25 854 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 MGEA5O60502 916 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 DGKIO75912 1065 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 ARF4P18085 180 aaPredicted RBP10.04□□□□□ -0.8
NUP54-207ENST00000508583 LIG1P18858 919 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 HOXA11P31270 313 aaPredicted RBP10.04□□□□□ -0.8
NUP54-207ENST00000508583 NDUFA8P51970 172 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 ASIC1P78348 528 aa10.04□□□□□ -0.8
NUP54-207ENST00000508583 BTG3Q14201 252 aaPredicted RBP10.04□□□□□ -0.8
NUP54-207ENST00000508583 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms