RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ZCCHC14Q8WYQ9 949 aaKnown RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 FUBP3Q96I24 572 aaKnown RBP eCLIP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 ZNF496Q96IT1 587 aaPredicted RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 LRGUKQ96M69 825 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 PPM1MQ96MI6 270 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 WWC2-AS2Q96NR7 200 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 SLITRK6Q9H5Y7 841 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 KIAA1586Q9HCI6 787 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 ALG13Q9NP73 1137 aaKnown RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 BLOC1S4Q9NUP1 217 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 TRMT13Q9NUP7 481 aaKnown RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 CLDND1Q9NY35 253 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 FBXO10Q9UK96 956 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 WASF3Q9UPY6 502 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 GPR52Q9Y2T5 361 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 H7BY64 318 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 K7ENM7 598 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 ERC2O15083 957 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 MUSKO15146 869 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 TBX1O43435 398 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 TLR5O60602 858 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 DGKIO75912 1065 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 BAIAP3O94812 1187 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 ITGAVP06756 1048 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 CYP2C19P33261 490 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 G3BP1Q13283 466 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 KCNAB2Q13303 367 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 PRSS53Q2L4Q9 553 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 INAVAQ3KP66 663 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 PHF19Q5T6S3 580 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 KIAA1614Q5VZ46 1190 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 SNX32Q86XE0 403 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 AHI1Q8N157 1196 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 LRRC47Q8N1G4 583 aaKnown RBP5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 Q8N1Y9 231 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 CCDC140Q96MF4 163 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 TMEM209Q96SK2 561 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 ZNF341Q9BYN7 854 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 RBPJLQ9UBG7 517 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 SYNPO2Q9UMS6 1093 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 PTPN22Q9Y2R2 807 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 TMX2Q9Y320 296 aa5.06□□□□□ -1.6
SMARCA5-202ENST00000508573 PABPN1LA6NDY0 278 aaKnown RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 PATE3B3GLJ2 98 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 PRKD3O94806 890 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 SNUPNO95149 360 aaKnown RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 CPP00450 1065 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 LTFP02788 710 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 PYGLP06737 847 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 IFIT1P09914 478 aaKnown RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 ZKSCAN1P17029 563 aaPredicted RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 BPIP17213 487 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 TDO2P48775 406 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 SELENOPP49908 381 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 ROR1Q01973 937 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 PCBP2Q15366 365 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 SPDYAQ5MJ70 313 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 AGAP9Q5VTM2 703 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 YOD1Q5VVQ6 348 aaPredicted RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 CHST15Q7LFX5 561 aaPredicted RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 TBC1D1Q86TI0 1168 aaPredicted RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 PPIL6Q8IXY8 311 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 NAXEQ8NCW5 288 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 NUDT10Q8NFP7 164 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 Q8TCH9 128 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 ATRIPQ8WXE1 791 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 HVCN1Q96D96 273 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 NUDT11Q96G61 164 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 SGCZQ96LD1 299 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 TTC1Q99614 292 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 CRB3Q9BUF7 120 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 MRPL4Q9BYD3 311 aaKnown RBP5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 SLC13A1Q9BZW2 595 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 PCED1AQ9H1Q7 454 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 SEMA4AQ9H3S1 761 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 CXorf56Q9H5V9 222 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 RSAD1Q9HA92 442 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 RASSF1Q9NS23 344 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 RRN3Q9NYV6 651 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 ODF2LQ9ULJ1 636 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 TPCN1Q9ULQ1 816 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 DNM3Q9UQ16 869 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 AFG3L2Q9Y4W6 797 aa5.05□□□□□ -1.6
SMARCA5-202ENST00000508573 A6NNZ2 444 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 SUSD5O60279 629 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 KPNA6O60684 536 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 TMCC2O75069 709 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 GFPT2O94808 682 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 INMTO95050 263 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 MBD4O95243 580 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 CNOT4O95628 575 aaKnown RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 CD4P01730 458 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 MYBL2P10244 700 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 HSD3B1P14060 373 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 CHKAP35790 457 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 LTBRP36941 435 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 IARSP41252 1262 aaKnown RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 RAD52P43351 418 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 NEK4P51957 841 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 MPP1Q00013 466 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms