RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 FGD4Q96M96 766 aa5.63□□□□□ -1.51
NUP54-206ENST00000508465 COA1Q9GZY4 146 aa5.63□□□□□ -1.51
NUP54-206ENST00000508465 GZF1Q9H116 711 aaPredicted RBP5.63□□□□□ -1.51
NUP54-206ENST00000508465 CD209Q9NNX6 404 aa5.63□□□□□ -1.51
NUP54-206ENST00000508465 JADE2Q9NQC1 790 aa5.63□□□□□ -1.51
NUP54-206ENST00000508465 PPP4R1LQ9P1A2 415 aa5.63□□□□□ -1.51
NUP54-206ENST00000508465 ABT1Q9ULW3 272 aaKnown RBP5.63□□□□□ -1.51
NUP54-206ENST00000508465 PA2G4Q9UQ80 394 aaKnown RBP5.63□□□□□ -1.51
NUP54-206ENST00000508465 PCDHAC2Q9Y5I4 1007 aa5.63□□□□□ -1.51
NUP54-206ENST00000508465 PASKQ96RG2 1323 aa5.63□□□□□ -1.51
NUP54-206ENST00000508465 LTBP1Q14766 1721 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 ADM5C9JUS6 153 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 SGSM2O43147 1006 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 B4GALT3O60512 393 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 CYP7B1O75881 506 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 CELF2O95319 508 aaKnown RBP5.62□□□□□ -1.51
NUP54-206ENST00000508465 AMHP03971 560 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 EPHX1P07099 455 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 RPS12P25398 132 aaKnown RBP5.62□□□□□ -1.51
NUP54-206ENST00000508465 HIBADHP31937 336 aaKnown RBP5.62□□□□□ -1.51
NUP54-206ENST00000508465 ZNF280AP59817 542 aaPredicted RBP5.62□□□□□ -1.51
NUP54-206ENST00000508465 NKX3-2P78367 333 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 CHAF1AQ13111 956 aaPredicted RBP5.62□□□□□ -1.51
NUP54-206ENST00000508465 ICAM4Q14773 271 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 CDSNQ15517 529 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 ZKSCAN2Q63HK3 967 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 ATG9AQ7Z3C6 839 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 KRT26Q7Z3Y9 468 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 MILR1Q7Z6M3 343 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 CERS5Q8N5B7 392 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 AGBL3Q8NEM8 1001 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 MMP19Q99542 508 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 SYT3Q9BQG1 590 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 YIPF4Q9BSR8 244 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 ZNF747Q9BV97 191 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 SEMA4AQ9H3S1 761 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 L2HGDHQ9H9P8 463 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 MYOZ2Q9NPC6 264 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 PGAP2Q9UHJ9 254 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 MED23Q9ULK4 1368 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 SPEF2Q9C093 1822 aa5.62□□□□□ -1.51
NUP54-206ENST00000508465 LRRC37AA6NMS7 1700 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 C22orf46C9J442 243 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 EYA2O00167 538 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 FRAT2O75474 233 aaPredicted RBP5.61□□□□□ -1.51
NUP54-206ENST00000508465 PDE8BO95263 885 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 GNAI3P08754 354 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 IL1R1P14778 569 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 SCN4AP35499 1836 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 ZNF76P36508 570 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 TIMM10P62072 90 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 PPP2CBP62714 309 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 PPP2CAP67775 309 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 AOX1Q06278 1338 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 COL9A2Q14055 689 aaPredicted RBP5.61□□□□□ -1.51
NUP54-206ENST00000508465 UBE4AQ14139 1066 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 SCN9AQ15858 1988 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 DEFB115Q30KQ5 88 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 ZBED9Q6R2W3 1325 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 ARHGEF18Q6ZSZ5 1173 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 MROH5Q6ZUA9 1318 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 C15orf52Q6ZUT6 534 aaKnown RBP5.61□□□□□ -1.51
NUP54-206ENST00000508465 ZNF804AQ7Z570 1209 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 VPS37DQ86XT2 251 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 FAM126BQ8IXS8 530 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
NUP54-206ENST00000508465 GIPC2Q8TF65 315 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 DCPSQ96C86 337 aaKnown RBP5.61□□□□□ -1.51
NUP54-206ENST00000508465 YTHDC1Q96MU7 727 aaKnown RBP5.61□□□□□ -1.51
NUP54-206ENST00000508465 TMEM168Q9H0V1 697 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 GGA3Q9NZ52 723 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 CLEC1BQ9P126 229 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 TCAF1Q9Y4C2 921 aa5.61□□□□□ -1.51
NUP54-206ENST00000508465 MYH3P11055 1940 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 KIF16BQ96L93 1317 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 PNMA6EA0A0J9YXQ4 647 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 GNAI2P04899 355 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 ADORA1P30542 326 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 SLC6A11P48066 632 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 RBM5P52756 815 aaKnown RBP eCLIP5.6□□□□□ -1.51
NUP54-206ENST00000508465 MFAP1P55081 439 aaKnown RBP5.6□□□□□ -1.51
NUP54-206ENST00000508465 TFCP2Q12800 502 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 CYP4F22Q6NT55 531 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 ZNF585AQ6P3V2 769 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 MOB2Q70IA6 237 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 ITPRIPQ8IWB1 547 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 VGLL2Q8N8G2 317 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 TDRD7Q8NHU6 1098 aaKnown RBP5.6□□□□□ -1.51
NUP54-206ENST00000508465 CD248Q9HCU0 757 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 AKT3Q9Y243 479 aa5.6□□□□□ -1.51
NUP54-206ENST00000508465 POLR2AP24928 1970 aaKnown RBP5.6□□□□□ -1.51
NUP54-206ENST00000508465 CLRN2A0PK11 232 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 UBE2Q2LH0YL09 131 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 WNT10BO00744 389 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 THBDP07204 575 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 IFIT1P09914 478 aaKnown RBP5.59□□□□□ -1.51
NUP54-206ENST00000508465 PLS3P13797 630 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 FGFR2P21802 821 aa5.59□□□□□ -1.51
NUP54-206ENST00000508465 PRKG1Q13976 671 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms