RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 RBM23Q86U06 439 aaKnown RBP10.39□□□□□ -0.75
DDX41-209ENST00000508279 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 P2RX5Q93086 422 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 IFT74Q96LB3 600 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 ZNF558Q96NG5 402 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 MMTAG2Q9BU76 263 aaKnown RBP10.39□□□□□ -0.75
DDX41-209ENST00000508279 KIFC3Q9BVG8 833 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 EIF2AQ9BY44 585 aaKnown RBP10.39□□□□□ -0.75
DDX41-209ENST00000508279 LMAN2LQ9H0V9 348 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 CLDND1Q9NY35 253 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 COG5Q9UP83 839 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 HES2Q9Y543 173 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 PCDHGC5Q9Y5F6 944 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 TRIP11Q15643 1979 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 CCDC169A6NNP5 214 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 H3BQ06 376 aaPredicted RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 NPTXRO95502 500 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 EYA4O95677 639 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 ITGA4P13612 1032 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 ARF4P18085 180 aaPredicted RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 MARCKSP29966 332 aaPredicted RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 AXLP30530 894 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 IRS1P35568 1242 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 PPP2R5AQ15172 486 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 CLUL1Q15846 466 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 NAALADL2Q58DX5 795 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 NOMO2Q5JPE7 1267 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 UBXN11Q5T124 520 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 PLPP4Q5VZY2 271 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 ARL6IP4Q66PJ3 421 aaKnown RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 AGMOQ6ZNB7 445 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 KCNK18Q7Z418 384 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 ADGRD2Q7Z7M1 963 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 CABP7Q86V35 215 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 URGCPQ8TCY9 931 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 FAM193BQ96PV7 902 aaPredicted RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 RUSC1Q9BVN2 902 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 MRPL9Q9BYD2 267 aaKnown RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 CSRNP2Q9H175 543 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 UBE2ZQ9H832 354 aaPredicted RBP10.38□□□□□ -0.75
DDX41-209ENST00000508279 RSAD1Q9HA92 442 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 ENTPD7Q9NQZ7 604 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 TLR9Q9NR96 1032 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 USP20Q9Y2K6 914 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 IPPQ9Y573 584 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 CLIC4Q9Y696 253 aa10.38□□□□□ -0.75
DDX41-209ENST00000508279 SFI1A8K8P3 1242 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 STX6O43752 255 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 ZNF623O75123 536 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 HIP1RO75146 1068 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 OFD1O75665 1012 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 BMP15O95972 392 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 POMCP01189 267 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 PRKCBP05771 671 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 AKAP5P24588 427 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 UBA7P41226 1012 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 NAMPTP43490 491 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 ALDH7A1P49419 539 aaKnown RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 PEX3P56589 373 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 BCAR1P56945 870 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 KRT17Q04695 432 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 GRIN1Q05586 938 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 POU5F1BQ06416 359 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 HYAL1Q12794 435 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 RESTQ13127 1097 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 CAMK1Q14012 370 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 MAPK6Q16659 721 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 AMHR2Q16671 573 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 FOXD4L6Q3SYB3 417 aaPredicted RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 SPECC1Q5M775 1068 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 FOXD4L3Q6VB84 417 aaPredicted RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 IFNLR1Q8IU57 520 aaPredicted RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 SMG8Q8ND04 991 aaKnown RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 ADAMTS19Q8TE59 1207 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 KIFAP3Q92845 792 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 PPP2R3CQ969Q6 453 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 SNX21Q969T3 373 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 CALML4Q96GE6 196 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 NECAB3Q96P71 396 aaPredicted RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 PNMA5Q96PV4 448 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 TRAIPQ9BWF2 469 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 NT5C3AQ9H0P0 336 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 C2orf40Q9H1Z8 148 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 NXF3Q9H4D5 531 aaKnown RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 NRDE2Q9H7Z3 1164 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 TBC1D13Q9NVG8 400 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 PRMT7Q9NVM4 692 aaPredicted RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 SPG21Q9NZD8 308 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 KLK14Q9P0G3 267 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 PARP2Q9UGN5 583 aa10.37□□□□□ -0.75
DDX41-209ENST00000508279 PUF60Q9UHX1 559 aaKnown RBP10.37□□□□□ -0.75
DDX41-209ENST00000508279 NPHP3-ACAD11A0A0J9YXS1 232 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 PER2O15055 1255 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 LINC01565O15544 149 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 PLA2G4BP0C869 781 aa10.36□□□□□ -0.75
DDX41-209ENST00000508279 NCLP19338 710 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms