RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SFI1A8K8P3 1242 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 ACKR2O00590 384 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
RNF4-210ENST00000508235 PRKCBP05771 671 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 MYOGP15173 224 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 ARF4P18085 180 aaPredicted RBP16.53■□□□□ 0.24
RNF4-210ENST00000508235 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
RNF4-210ENST00000508235 ZNF131P52739 623 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 PRPF4BQ13523 1007 aaKnown RBP16.53■□□□□ 0.24
RNF4-210ENST00000508235 E2F4Q16254 413 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 AMHR2Q16671 573 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 TMEM132AQ24JP5 1023 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 APBB1IPQ7Z5R6 666 aaPredicted RBP16.53■□□□□ 0.24
RNF4-210ENST00000508235 CMTR2Q8IYT2 770 aaKnown RBP16.53■□□□□ 0.24
RNF4-210ENST00000508235 HACE1Q8IYU2 909 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 CEP57L1Q8IYX8 460 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 ABI1Q8IZP0 508 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 MYCT1Q8N699 235 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 DDX12PQ92771 950 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 CHAMP1Q96JM3 812 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 CCDC113Q9H0I3 377 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 ZHX3Q9H4I2 956 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 ARHGAP28Q9P2N2 729 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 A0A1B0GUA9 196 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 RBAK-RBAKDNI3L0D1 243 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 N4BP3O15049 544 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 ZNF623O75123 536 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 LIG1P18858 919 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 IBSPP21815 317 aaPredicted RBP16.52■□□□□ 0.24
RNF4-210ENST00000508235 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
RNF4-210ENST00000508235 STRN3Q13033 797 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 SLC27A1Q6PCB7 646 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 DYMQ7RTS9 669 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 DEFB123Q8N688 67 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
RNF4-210ENST00000508235 ADPGKQ9BRR6 497 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 KIFC3Q9BVG8 833 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 TRIM6Q9C030 488 aaPredicted RBP16.52■□□□□ 0.24
RNF4-210ENST00000508235 KBTBD4Q9NVX7 518 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 SEL1LQ9UBV2 794 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 RWDD3Q9Y3V2 267 aa16.52■□□□□ 0.24
RNF4-210ENST00000508235 RALGAPA2Q2PPJ7 1873 aa16.52■□□□□ 0.23
RNF4-210ENST00000508235 FNDC1Q4ZHG4 1894 aaPredicted RBP16.52■□□□□ 0.23
RNF4-210ENST00000508235 NLRC5Q86WI3 1866 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 MYMKA6NI61 221 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 SLC16A4O15374 487 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 B4GALT5O43286 388 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 TRAK2O60296 914 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 PFKFB1P16118 471 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 GAP43P17677 238 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 NCKAP1LP55160 1127 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 TAP1Q03518 808 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 BTG3Q14201 252 aaPredicted RBP16.51■□□□□ 0.23
RNF4-210ENST00000508235 ZNF598Q86UK7 904 aaKnown RBP16.51■□□□□ 0.23
RNF4-210ENST00000508235 FAM178BQ8IXR5 827 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 FIBCD1Q8N539 461 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 RNF169Q8NCN4 708 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 KCNN1Q92952 543 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 CPB2Q96IY4 423 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 SAMD11Q96NU1 681 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
RNF4-210ENST00000508235 MRPL4Q9BYD3 311 aaKnown RBP16.51■□□□□ 0.23
RNF4-210ENST00000508235 SEMA6BQ9H3T3 888 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 RC3H2Q9HBD1 1191 aaKnown RBP16.51■□□□□ 0.23
RNF4-210ENST00000508235 GDPD2Q9HCC8 539 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 PCDHB2Q9Y5E7 798 aa16.51■□□□□ 0.23
RNF4-210ENST00000508235 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 MAPTP10636 758 aaKnown RBP16.5■□□□□ 0.23
RNF4-210ENST00000508235 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 TMEM161BQ8NDZ6 487 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
RNF4-210ENST00000508235 CCDC34Q96HJ3 373 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 TGS1Q96RS0 853 aaKnown RBP16.5■□□□□ 0.23
RNF4-210ENST00000508235 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 TTYH1Q9H313 450 aaPredicted RBP16.5■□□□□ 0.23
RNF4-210ENST00000508235 UBN1Q9NPG3 1134 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 HPSEQ9Y251 543 aa16.5■□□□□ 0.23
RNF4-210ENST00000508235 RANBP2P49792 3224 aaKnown RBP16.49■□□□□ 0.23
RNF4-210ENST00000508235 FAM237AA0A1B0GTK4 181 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 TBKBP1A7MCY6 615 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 K7ENM7 598 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 SLFN14P0C7P3 912 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 IDEP14735 1019 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 SYKP43405 635 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 DCAF4L1Q3SXM0 396 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 UBXN11Q5T124 520 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 ATF7IP2Q5U623 682 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 CNNM4Q6P4Q7 775 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 GLB1LQ6UWU2 654 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 HAUS6Q7Z4H7 955 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 MRPL10Q7Z7H8 261 aaKnown RBP16.49■□□□□ 0.23
RNF4-210ENST00000508235 FSIP1Q8NA03 581 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 MRPL9Q9BYD2 267 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms