RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 UBE2R2Q712K3 238 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 MTDHQ86UE4 582 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 LIX1LQ8IVB5 337 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PEX5LQ8IYB4 626 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ZSCAN1Q8NBB4 408 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 CCHCR1Q8TD31 782 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 TCEANC2Q96MN5 208 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PYM1Q9BRP8 204 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 CNPPD1Q9BV87 410 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 HERC2P3Q9BVR0 1158 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 TNMDQ9H2S6 317 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 RXFP3Q9NSD7 469 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PPP4R2Q9NY27 417 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PCDHB12Q9Y5F1 795 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ZNF804BA4D1E1 1349 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 TCRBV16S1A1N1A0A5B0 115 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CCDC169A6NNP5 214 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 UBE2CO00762 179 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 B3GALT2O43825 422 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CILPO75339 1184 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CHGBP05060 677 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SOX6P35712 828 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 HNMTP50135 292 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CACNB3P54284 484 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SLC12A3P55017 1021 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 AIMP1Q12904 312 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 BFSP1Q12934 665 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 PMS2P11Q13670 270 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 ZSCAN26Q16670 478 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 TMEM266Q2M3C6 531 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SV2CQ496J9 727 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CCDC152Q4G0S7 254 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 BOLA3Q53S33 107 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SLC22A25Q6T423 547 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 KIF21AQ7Z4S6 1674 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 ANKRD53Q8N9V6 530 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SEPT1Q8WYJ6 367 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 DHTKD1Q96HY7 919 aaPredicted RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SH3GL1Q99961 368 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 EHD4Q9H223 541 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 MRPL46Q9H2W6 279 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CHRDQ9H2X0 955 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 EVA1BQ9NVM1 165 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SRPK3Q9UPE1 567 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SNX8Q9Y5X2 465 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 H3BML4 177 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 MEN1O00255 615 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 KHNYNO15037 678 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SMC2O95347 1197 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CCNYL3P0C7X3 344 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 PDHBP11177 359 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 JUNDP17535 347 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CTSSP25774 331 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 NOS3P29474 1203 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 MTIF2P46199 727 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 RAB15P59190 212 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 ACTN3Q08043 901 aaPredicted RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 LRMPQ12912 555 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 TRPC3Q13507 836 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 KBTBD12Q3ZCT8 623 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 OTUD7BQ6GQQ9 843 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 NPNTQ6UXI9 565 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 VSIG10LQ86VR7 867 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 DENND1CQ8IV53 801 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 SH3RF3Q8TEJ3 882 aaPredicted RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CHTF18Q8WVB6 975 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 C8orf76Q96K31 380 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 WNT5BQ9H1J7 359 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 DZANK1Q9NVP4 752 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 ATP11BQ9Y2G3 1177 aa8.18□□□□□ -1.1
PDGFRA-206ENST00000508170 MRC2Q9UBG0 1479 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 H0YHG0 523 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 EML1O00423 815 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PAGE1O75459 146 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 FGF18O76093 207 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ACSL1P33121 698 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 DPP6P42658 865 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ETV1P50549 477 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CD83Q01151 205 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 MAPK7Q13164 816 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 TIGD6Q17RP2 521 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 DCLRE1AQ6PJP8 1040 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 MTHFD1LQ6UB35 978 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ZNF765Q7L2R6 523 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PIWIL3Q7Z3Z3 882 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 SLFN11Q7Z7L1 901 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 AADATQ8N5Z0 425 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PCSK9Q8NBP7 692 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CEP70Q8NHQ1 597 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PHKBQ93100 1093 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 OSBP2Q969R2 916 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CDCA5Q96FF9 252 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 TMEM169Q96HH4 297 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 YIPF2Q9BWQ6 316 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms