RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SLC9A9Q8IVB4 645 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 REPS2Q8NFH8 660 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 ZNF526Q8TF50 670 aaPredicted RBP15.71■□□□□ 0.11
DDX41-208ENST00000507955 SEMA4DQ92854 862 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 SYT11Q9BT88 431 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 TMEM117Q9H0C3 514 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 DDX47Q9H0S4 455 aaKnown RBP15.71■□□□□ 0.11
DDX41-208ENST00000507955 TMEM206Q9H813 350 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 COG5Q9UP83 839 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 NR2E1Q9Y466 385 aa15.71■□□□□ 0.11
DDX41-208ENST00000507955 VGLL3A8MV65 326 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 CNGA1P29973 690 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 SP2Q02086 613 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 C10orf76Q5T2E6 689 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 CCDC60Q8IWA6 550 aaPredicted RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 TMEM161BQ8NDZ6 487 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 MOV10L1Q9BXT6 1211 aaKnown RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 GGA3Q9NZ52 723 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 ATMINO43313 823 aaPredicted RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 SHOX2O60902 331 aaPredicted RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 ZBTB48P10074 688 aaPredicted RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 TNFAIP3P21580 790 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 HIRAP54198 1017 aaPredicted RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 AADACL2Q6P093 401 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 INTS8Q75QN2 995 aaKnown RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 PPM1KQ8N3J5 372 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 GOLGA6L1Q8N7Z2 621 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 CASKIN2Q8WXE0 1202 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 A1CFQ9NQ94 594 aaKnown RBP15.7■□□□□ 0.1
DDX41-208ENST00000507955 TBX20Q9UMR3 447 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 PCDHA10Q9Y5I2 948 aa15.7■□□□□ 0.1
DDX41-208ENST00000507955 GOLGA6CA6NDK9 693 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 FZD9O00144 591 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 SGPL1O95470 568 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 GOLGA6DP0CG33 693 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 RPS12P25398 132 aaKnown RBP15.69■□□□□ 0.1
DDX41-208ENST00000507955 PPARDQ03181 441 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 SNRNP35Q16560 246 aaKnown RBP15.69■□□□□ 0.1
DDX41-208ENST00000507955 LMBRD2Q68DH5 695 aaPredicted RBP15.69■□□□□ 0.1
DDX41-208ENST00000507955 SLC39A4Q6P5W5 647 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 CYFIP1Q7L576 1253 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 NT5DC3Q86UY8 548 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 TSPYL1Q9H0U9 437 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 GOLGA6AQ9NYA3 693 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 KIAA1217Q5T5P2 1943 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 BTNL10A8MVZ5 291 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 PPFIA4O75335 1185 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 KCNA2P16389 499 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 DSG3P32926 999 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 CNTN2Q02246 1040 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 ZNF211Q13398 564 aaPredicted RBP15.69■□□□□ 0.1
DDX41-208ENST00000507955 CPNE8Q86YQ8 564 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 FAM76AQ8TAV0 307 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 ARL8AQ96BM9 186 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 SH3GL2Q99962 352 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 PI4K2AQ9BTU6 479 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 R3HDMLQ9H3Y0 253 aa15.69■□□□□ 0.1
DDX41-208ENST00000507955 NOC2LQ9Y3T9 749 aaKnown RBP15.69■□□□□ 0.1
DDX41-208ENST00000507955 LYPLA2O95372 231 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 DLATP10515 647 aaKnown RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 CCND2P30279 289 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 NCKAP1LP55160 1127 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 KRT76Q01546 638 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 PRPF4BQ13523 1007 aaKnown RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 EPC2Q52LR7 807 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 SLC47A2Q86VL8 602 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 PCDHB18PQ96TA0 734 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 RABEP2Q9H5N1 569 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 KMT5AQ9NQR1 393 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 CYP39A1Q9NYL5 469 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 SEPT9Q9UHD8 586 aaPredicted RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 STXBP5LQ9Y2K9 1186 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 TMEM110-MUSTN1A8MSY1 372 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 CYP26A1O43174 497 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 MXI1P50539 228 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 JAK3P52333 1124 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 DNAJC21Q5F1R6 531 aaKnown RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 DCAF12L1Q5VU92 463 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 RPUSD2Q8IZ73 545 aaKnown RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 CTNNBL1Q8WYA6 563 aaPredicted RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 KREMEN1Q96MU8 473 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 AGPAT1Q99943 283 aa15.68■□□□□ 0.1
DDX41-208ENST00000507955 CELF4Q9BZC1 486 aaKnown RBP15.68■□□□□ 0.1
DDX41-208ENST00000507955 STBD1O95210 358 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 LMNB1P20700 586 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 DMP1Q13316 513 aaPredicted RBP15.67■□□□□ 0.1
DDX41-208ENST00000507955 LLGL1Q15334 1064 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 TTMPQ5BVD1 217 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 DCAF15Q66K64 600 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 KLRG1Q96E93 195 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 XPNPEP1Q9NQW7 623 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 GDF3Q9NR23 364 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 TMOD4Q9NZQ9 345 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 AMACRQ9UHK6 382 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 TMEM59LQ9UK28 342 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 KRT14P02533 472 aa15.67■□□□□ 0.1
DDX41-208ENST00000507955 FTLP02792 175 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms