RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 BRDTQ58F21 947 aaPredicted RBP19.18■□□□□ 0.66
SFXN1-208ENST00000507823 CDCA5Q96FF9 252 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 CAPZA3Q96KX2 299 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 SEPT9Q9UHD8 586 aaPredicted RBP19.18■□□□□ 0.66
SFXN1-208ENST00000507823 AGTPBP1Q9UPW5 1226 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 CES2O00748 559 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 MAP2K7O14733 419 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 SLC25A27O95847 323 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 TGFB3P10600 412 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 GTF2H1P32780 548 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 ENOX2Q16206 610 aaKnown RBP19.18■□□□□ 0.66
SFXN1-208ENST00000507823 NFRKBQ6P4R8 1299 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 ZNF526Q8TF50 670 aaPredicted RBP19.18■□□□□ 0.66
SFXN1-208ENST00000507823 RUBCNQ92622 972 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 TMEM117Q9H0C3 514 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 ASCC2Q9H1I8 757 aaPredicted RBP19.18■□□□□ 0.66
SFXN1-208ENST00000507823 DHX33Q9H6R0 707 aaKnown RBP19.18■□□□□ 0.66
SFXN1-208ENST00000507823 ELP3Q9H9T3 547 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 SASH3O75995 380 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 OATP04181 439 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 RHOXF2BP0C7M4 288 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 VSNL1P62760 191 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 SNRNP35Q16560 246 aaKnown RBP19.17■□□□□ 0.66
SFXN1-208ENST00000507823 IFI16Q16666 785 aaKnown RBP19.17■□□□□ 0.66
SFXN1-208ENST00000507823 GADL1Q6ZQY3 521 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 CYFIP1Q7L576 1253 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 TAS1R3Q7RTX0 852 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 LRRC57Q8N9N7 239 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 RHOXF2Q9BQY4 288 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 KIFC3Q9BVG8 833 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 ZNF302Q9NR11 478 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 ERLIN1O75477 346 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 H2AFZP0C0S5 128 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 YBX3P16989 372 aaKnown RBP eCLIP19.17■□□□□ 0.668e-9■□□□□ 10.8
SFXN1-208ENST00000507823 UBA1P22314 1058 aaKnown RBP19.17■□□□□ 0.66
SFXN1-208ENST00000507823 MCM3P25205 808 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 PLA2G4AP47712 749 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 C9orf131Q5VYM1 1079 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 H2AFVQ71UI9 128 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 PARD3BQ8TEW8 1205 aa19.17■□□□□ 0.66
SFXN1-208ENST00000507823 FARP2O94887 1054 aaPredicted RBP19.16■□□□□ 0.66
SFXN1-208ENST00000507823 MXI1P50539 228 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 IRX3P78415 501 aaPredicted RBP19.16■□□□□ 0.66
SFXN1-208ENST00000507823 SLFN11Q7Z7L1 901 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 CBWD2Q8IUF1 395 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 AFAP1L1Q8TED9 768 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 CLMNQ96JQ2 1002 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 L1RE1Q9UN81 338 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 STYXL1Q9Y6J8 313 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 NCANO14594 1321 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 GSTTP1A0A1W2PQM5 241 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 NCK2O43639 380 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 GCLMP48507 274 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 SOX10P56693 466 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 EMC2Q15006 297 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 TARBP2Q15633 366 aaKnown RBP19.16■□□□□ 0.66
SFXN1-208ENST00000507823 CAGE1Q8TC20 777 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 OTUD5Q96G74 571 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 IFT74Q96LB3 600 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 SYT17Q9BSW7 474 aa19.16■□□□□ 0.66
SFXN1-208ENST00000507823 POLR3FQ9H1D9 316 aaPredicted RBP19.16■□□□□ 0.66
SFXN1-208ENST00000507823 PEX10O60683 326 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 PIGRP01833 764 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 NF2P35240 595 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 ARL2P36404 184 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 SPATA4Q8NEY3 305 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 PCYT2Q99447 389 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 PORCNQ9H237 461 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 PPME1Q9Y570 386 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 NEDD9Q14511 834 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 ARHGEF19Q8IW93 802 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 FGD4Q96M96 766 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 TMEM8AQ9HCN3 771 aa19.15■□□□□ 0.66
SFXN1-208ENST00000507823 DNAJC25-GNG10A0A024R161 153 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 FOXN3O00409 490 aaPredicted RBP19.14■□□□□ 0.65
SFXN1-208ENST00000507823 ZBTB48P10074 688 aaPredicted RBP19.14■□□□□ 0.65
SFXN1-208ENST00000507823 GPC3P51654 580 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 CYP24A1Q07973 514 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 SEPT14Q6ZU15 432 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 TRMT1LQ7Z2T5 733 aaKnown RBP19.14■□□□□ 0.65
SFXN1-208ENST00000507823 TPCN2Q8NHX9 752 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 ABCB6Q9NP58 842 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 LRRIQ3A6PVS8 624 aaPredicted RBP19.14■□□□□ 0.65
SFXN1-208ENST00000507823 SOCS7O14512 581 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 KIAA0391O15091 583 aaKnown RBP19.14■□□□□ 0.65
SFXN1-208ENST00000507823 TMEM253P0C7T8 217 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 RFC5P40937 340 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 NAP1L1P55209 391 aaKnown RBP19.14■□□□□ 0.65
SFXN1-208ENST00000507823 CLDN10P78369 228 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 SP4Q02446 784 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 KRT39Q6A163 491 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 NCAPG2Q86XI2 1143 aa19.14■□□□□ 0.65
SFXN1-208ENST00000507823 LOC102724159A0A0B4J2E5 919 aa19.13■□□□□ 0.65
SFXN1-208ENST00000507823 GOLGA8IPA6NC78 632 aa19.13■□□□□ 0.65
SFXN1-208ENST00000507823 GOLGA8JA6NMD2 632 aa19.13■□□□□ 0.65
SFXN1-208ENST00000507823 NAMPTP43490 491 aa19.13■□□□□ 0.65
SFXN1-208ENST00000507823 TCEAL1Q15170 157 aa19.13■□□□□ 0.65
SFXN1-208ENST00000507823 PWP2Q15269 919 aaKnown RBP19.13■□□□□ 0.65
SFXN1-208ENST00000507823 MTERF2Q49AM1 385 aa19.13■□□□□ 0.65
SFXN1-208ENST00000507823 GPD1LQ8N335 351 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms