RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PDE4DIPQ5VU43 2346 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 A0A1W2PP55 124 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 RBAK-RBAKDNI3L0D1 243 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 ARVCFO00192 962 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 MEIS1O00470 390 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 NOP56O00567 594 aaKnown RBP10.74□□□□□ -0.69
CLCN3-205ENST00000506924 CABYRO75952 493 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 CYP3A4P08684 503 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 KRT2P35908 639 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 ITGB3BPQ13352 177 aaPredicted RBP10.74□□□□□ -0.69
CLCN3-205ENST00000506924 TRIM29Q14134 588 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 NEDD9Q14511 834 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 SNX17Q15036 470 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 DGKDQ16760 1214 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 FAM47CQ5HY64 1035 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 KRT40Q6A162 431 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 PIK3AP1Q6ZUJ8 805 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 FAM184AQ8NB25 1140 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 DAGLBQ8NCG7 672 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 CRYGNQ8WXF5 182 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 KAT2BQ92831 832 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 GJA10Q969M2 543 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 C8orf76Q96K31 380 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 OSMRQ99650 979 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 GPR20Q99678 358 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 LLPHQ9BRT6 129 aaKnown RBP10.74□□□□□ -0.69
CLCN3-205ENST00000506924 TRPV6Q9H1D0 765 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 RASSF4Q9H2L5 321 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 SUV39H2Q9H5I1 410 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 AGO4Q9HCK5 861 aaKnown RBP10.74□□□□□ -0.69
CLCN3-205ENST00000506924 MKL2Q9ULH7 1088 aa10.74□□□□□ -0.69
CLCN3-205ENST00000506924 IGLV3-22A0A075B6J6 115 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 CCDC194A0A1B0GVG4 234 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 TRIM43BA6NCK2 446 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 BTBD18B2RXH4 712 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 TDP2O95551 362 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 MMP1P03956 469 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 CDK7P50613 346 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 AFF1P51825 1210 aaKnown RBP10.73□□□□□ -0.69
CLCN3-205ENST00000506924 FAAP100Q0VG06 881 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 NONOQ15233 471 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLCN3-205ENST00000506924 LETM2Q2VYF4 491 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 MCTP2Q6DN12 878 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 GALNT17Q6IS24 598 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 METTL7BQ6UX53 244 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 TEX2Q8IWB9 1127 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 DIS3L2Q8IYB7 885 aaKnown RBP10.73□□□□□ -0.69
CLCN3-205ENST00000506924 TRIM43Q96BQ3 446 aaPredicted RBP10.73□□□□□ -0.69
CLCN3-205ENST00000506924 CDHR1Q96JP9 859 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 SENP7Q9BQF6 1050 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 MUC3BQ9H195 1237 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 PDLIM7Q9NR12 457 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 TRMT13Q9NUP7 481 aaKnown RBP10.73□□□□□ -0.69
CLCN3-205ENST00000506924 STK17AQ9UEE5 414 aa10.73□□□□□ -0.69
CLCN3-205ENST00000506924 GSTTP1A0A1W2PQM5 241 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 DCDC2CA8MYV0 355 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 PDE2AO00408 941 aaPredicted RBP10.72□□□□□ -0.69
CLCN3-205ENST00000506924 B4GALT4O60513 344 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 KPNA6O60684 536 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 LGALS2P05162 132 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 CLTBP09497 229 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 ATP2B1P20020 1258 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 TCF7P36402 384 aaPredicted RBP10.72□□□□□ -0.69
CLCN3-205ENST00000506924 MCM2P49736 904 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 HMGN5P82970 282 aaKnown RBP10.72□□□□□ -0.69
CLCN3-205ENST00000506924 FAM126BQ8IXS8 530 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 BEND7Q8N7W2 519 aaPredicted RBP10.72□□□□□ -0.69
CLCN3-205ENST00000506924 SLC43A3Q8NBI5 491 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 NUDT8Q8WV74 236 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 NXPE3Q969Y0 559 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 SDF4Q9BRK5 362 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 ZNF577Q9BSK1 485 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 C16orf70Q9BSU1 422 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 ADAM19Q9H013 955 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 BRMS1Q9HCU9 246 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 TMEM39AQ9NV64 488 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 PRKAG2Q9UGJ0 569 aa10.72□□□□□ -0.69
CLCN3-205ENST00000506924 IPO5O00410 1097 aaKnown RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 GNB5O14775 395 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 TLR3O15455 904 aaKnown RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 MSH4O15457 936 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 MAFGO15525 162 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 SLC37A4O43826 429 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 CCNT1O60563 726 aaKnown RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 CYP2C9P11712 490 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 NID1P14543 1247 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 ITGB8P26012 769 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 MARK3P27448 753 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 GJB2P29033 226 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 CIITAP33076 1130 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 MAGEA10P43363 369 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 USP11P51784 963 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 ZNF200P98182 395 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 ATP11AP98196 1134 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 KIAA0753Q2KHM9 967 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 CEP135Q66GS9 1140 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 LINC00114Q6XXX2 140 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 NIPA1Q7RTP0 329 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 ANKRD33Q7Z3H0 272 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms