RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 HOXB13Q92826 284 aaPredicted RBP3.95□□□□□ -1.78
GYPB-207ENST00000506679 FUBP3Q96I24 572 aaKnown RBP eCLIP3.95□□□□□ -1.78
GYPB-207ENST00000506679 FAXDC2Q96IV6 333 aa3.95□□□□□ -1.78
GYPB-207ENST00000506679 LRRC37BQ96QE4 947 aa3.95□□□□□ -1.78
GYPB-207ENST00000506679 AGO3Q9H9G7 860 aaKnown RBP3.95□□□□□ -1.78
GYPB-207ENST00000506679 DNAJC28Q9NX36 388 aa3.95□□□□□ -1.78
GYPB-207ENST00000506679 SPEF1Q9Y4P9 236 aa3.95□□□□□ -1.78
GYPB-207ENST00000506679 RBM8AQ9Y5S9 174 aaKnown RBP3.95□□□□□ -1.78
GYPB-207ENST00000506679 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 FOXS1O43638 330 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 CDC14BO60729 498 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 RAD17O75943 681 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 ALDH1A2O94788 518 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 MT-CO1P00395 513 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 CTSSP25774 331 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 RPS19P39019 145 aaKnown RBP3.94□□□□□ -1.78
GYPB-207ENST00000506679 SLC5A3P53794 718 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 CDK17Q00537 523 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 PPP3CAQ08209 521 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 ACAP1Q15027 740 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 PCBP2Q15366 365 aaKnown RBP eCLIP3.94□□□□□ -1.78
GYPB-207ENST00000506679 C19orf54Q5BKX5 351 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 MBNL2Q5VZF2 373 aaKnown RBP3.94□□□□□ -1.78
GYPB-207ENST00000506679 TCTN3Q6NUS6 607 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 LIMS2Q7Z4I7 341 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 TAX1BP1Q86VP1 789 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 CIR1Q86X95 450 aaPredicted RBP3.94□□□□□ -1.78
GYPB-207ENST00000506679 AMOTL1Q8IY63 956 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 SHCBP1Q8NEM2 672 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 SNX33Q8WV41 574 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 JADE3Q92613 823 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 FATE1Q969F0 183 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 GNRHR2Q96P88 292 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 UIMC1Q96RL1 719 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 BDH2Q9BUT1 245 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 PLA2G12BQ9BX93 195 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 NELFAQ9H3P2 528 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 CD248Q9HCU0 757 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 ING3Q9NXR8 418 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 ZNF536O15090 1300 aa3.94□□□□□ -1.78
GYPB-207ENST00000506679 NPEPPSL1A6NEC2 478 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 FOXD2O60548 495 aaPredicted RBP3.93□□□□□ -1.78
GYPB-207ENST00000506679 MYBL2P10244 700 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 OSMP13725 252 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 WASP42768 502 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 MCAMP43121 646 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 NEK2P51955 445 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 EFEMP1Q12805 493 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 MALLQ13021 153 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 UBE3CQ15386 1083 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 MST1LQ2TV78 715 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 TMEM240Q5SV17 173 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 PGM2L1Q6PCE3 622 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 LILRA6Q6PI73 481 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 GLB1LQ6UWU2 654 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 ABHD15Q6UXT9 468 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 ANKRD13AQ8IZ07 590 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 CMTM4Q8IZR5 234 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 FUKQ8N0W3 1084 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 TTC9BQ8N6N2 239 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 RELTQ969Z4 430 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 CHMP4CQ96CF2 233 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 RPL10LQ96L21 214 aaKnown RBP3.93□□□□□ -1.78
GYPB-207ENST00000506679 SAMD11Q96NU1 681 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 ACE2Q9BYF1 805 aaPredicted RBP3.93□□□□□ -1.78
GYPB-207ENST00000506679 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 GREM2Q9H772 168 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 IL23AQ9NPF7 189 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 TUBD1Q9UJT1 453 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 ZFR2Q9UPR6 939 aaKnown RBP3.93□□□□□ -1.78
GYPB-207ENST00000506679 JAG2Q9Y219 1238 aa3.93□□□□□ -1.78
GYPB-207ENST00000506679 NRP1O14786 923 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 ZRANB2O95218 330 aaKnown RBP eCLIP3.92□□□□□ -1.78
GYPB-207ENST00000506679 SYN1P17600 705 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 C5AR1P21730 350 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 MCL1Q07820 350 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 MGAT2Q10469 447 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 ICAM4Q14773 271 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 ODF1Q14990 250 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 PTPN21Q16825 1174 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 PLEKHG6Q3KR16 790 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 MUM1L1Q5H9M0 696 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 GJC2Q5T442 439 aaPredicted RBP3.92□□□□□ -1.78
GYPB-207ENST00000506679 GPR156Q8NFN8 814 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 Q8TCH9 128 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 TEKT5Q96M29 485 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 WWC2-AS2Q96NR7 200 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 SMAD5Q99717 465 aaKnown RBP3.92□□□□□ -1.78
GYPB-207ENST00000506679 TCF7L1Q9HCS4 588 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 TLR9Q9NR96 1032 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 RBM12Q9NTZ6 932 aaKnown RBP3.92□□□□□ -1.78
GYPB-207ENST00000506679 MKS1Q9NXB0 559 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 PLA2G3Q9NZ20 509 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 RPTORQ8N122 1335 aa3.92□□□□□ -1.78
GYPB-207ENST00000506679 A0A1W2PRX2 142 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 KLHL33A6NCF5 533 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 K7ESM1 405 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 PHF2O75151 1096 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 NDUFS2O75306 463 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 ALDH1L1O75891 902 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms