RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 MRPL10Q7Z7H8 261 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 IFNLR1Q8IU57 520 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 ABI1Q8IZP0 508 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 TCP11Q8WWU5 503 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 ZNF558Q96NG5 402 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 INO80BQ9C086 356 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 TUFT1Q9NNX1 390 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 INPP5FQ9Y2H2 1132 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 USP20Q9Y2K6 914 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 HES2Q9Y543 173 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 MYH11P35749 1972 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 HOXA2O43364 376 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 GAS2O43903 313 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 DGAT1O75907 488 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 GJB2P29033 226 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 KCNC3Q14003 757 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 EFHBQ8N7U6 833 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 AUTS2Q8WXX7 1259 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 POLR3CQ9BUI4 534 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 AAASQ9NRG9 546 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 CDH22Q9UJ99 828 aa18.61■□□□□ 0.57
PDLIM7-215ENST00000506161 ARF4P18085 180 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 CDC25AP30304 524 aa18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 UBE3AQ05086 875 aa18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 PTGDRQ13258 359 aa18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 DUSP6Q16828 381 aa18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 MICAL1Q8TDZ2 1067 aa18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 MIOSQ9NXC5 875 aa18.6■□□□□ 0.57
PDLIM7-215ENST00000506161 INO80B-WBP1J3KQ70 363 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 ASAP2O43150 1006 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 ZC3H11AO75152 810 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 RPA1P27694 616 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 SLC11A1P49279 550 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 ZP2Q05996 745 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 NOMO2Q5JPE7 1267 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 KCNK18Q7Z418 384 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 MMTAG2Q9BU76 263 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 CXCL16Q9H2A7 254 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 TLE6Q9H808 572 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 SPG21Q9NZD8 308 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 DBR1Q9UK59 544 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 LZTS1Q9Y250 596 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 IPPQ9Y573 584 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 C2orf16Q68DN1 1984 aa18.59■□□□□ 0.57
PDLIM7-215ENST00000506161 F8W810 466 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 GALTP07902 379 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 XRCC6P12956 609 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 TRAPPC10P48553 1259 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 NDUFV1P49821 464 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 RAB27AP51159 221 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 ORC2Q13416 577 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 GNL2Q13823 731 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 MXD4Q14582 209 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 SMAD2Q15796 467 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 EXOC8Q8IYI6 725 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 IGSF22Q8N9C0 903 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 GBP3Q9H0R5 595 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 NXF3Q9H4D5 531 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 CD207Q9UJ71 328 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 FAM50BQ9Y247 325 aa18.58■□□□□ 0.56
PDLIM7-215ENST00000506161 C19orf67A6NJJ6 358 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 ST18O60284 1047 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 POMCP01189 267 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 NCLP19338 710 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 CCT6AP40227 531 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 POU5F1BQ06416 359 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 LLGL2Q6P1M3 1020 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 PADI6Q6TGC4 694 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 HFE2Q6ZVN8 426 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 SMRP1Q8NCR6 262 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 MFSD14AQ96MC6 490 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 KIFC3Q9BVG8 833 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 MRPL9Q9BYD2 267 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 RSAD1Q9HA92 442 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 ENTPD7Q9NQZ7 604 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 PRKAG3Q9UGI9 489 aa18.57■□□□□ 0.56
PDLIM7-215ENST00000506161 C2orf71A6NGG8 1288 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 E9PMD0 336 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 ERLIN2O94905 339 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 EYA4O95677 639 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 SMAD4Q13485 552 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 CDCA2Q69YH5 1023 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 GLB1LQ6UWU2 654 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 GSTCDQ8NEC7 633 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 IGSF21Q96ID5 467 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 ZFP42Q96MM3 310 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 NACC1Q96RE7 527 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 GAD1Q99259 594 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 APOL6Q9BWW8 343 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 APOL5Q9BWW9 433 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 NFKBIZQ9BYH8 718 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 ZBP1Q9H171 429 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 CSRNP2Q9H175 543 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 MARCH5Q9NX47 278 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 CACNG4Q9UBN1 327 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 NOL7Q9UMY1 257 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms