RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 FAM105AQ9NUU6 356 aa6.58□□□□□ -1.36
GYPB-205ENST00000505583 DACT1Q9NYF0 836 aa6.58□□□□□ -1.36
GYPB-205ENST00000505583 SUCLA2Q9P2R7 463 aaPredicted RBP6.58□□□□□ -1.36
GYPB-205ENST00000505583 LIMD1Q9UGP4 676 aa6.58□□□□□ -1.36
GYPB-205ENST00000505583 PCDHA4Q9UN74 947 aa6.58□□□□□ -1.36
GYPB-205ENST00000505583 SORCS3Q9UPU3 1222 aa6.58□□□□□ -1.36
GYPB-205ENST00000505583 PIN4Q9Y237 131 aaKnown RBP6.58□□□□□ -1.36
GYPB-205ENST00000505583 INPP5FQ9Y2H2 1132 aa6.58□□□□□ -1.36
GYPB-205ENST00000505583 MYO15AQ9UKN7 3530 aa6.58□□□□□ -1.36
GYPB-205ENST00000505583 TDRD15B5MCY1 1934 aaKnown RBP6.57□□□□□ -1.36
GYPB-205ENST00000505583 FSD2A1L4K1 749 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 DDX11L8A8MPP1 907 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 F8W810 466 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 ZBTB39O15060 712 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 GFRA3O60609 400 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 LILRB3O75022 631 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 ZNF623O75123 536 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 MAFO75444 373 aaPredicted RBP6.57□□□□□ -1.36
GYPB-205ENST00000505583 SSBP05455 408 aaKnown RBP eCLIP6.57□□□□□ -1.36
GYPB-205ENST00000505583 MYBP10242 640 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 CTSAP10619 480 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 AKAP17AQ02040 695 aaKnown RBP6.57□□□□□ -1.36
GYPB-205ENST00000505583 ITIH3Q06033 890 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 MTMR3Q13615 1198 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 PTPN14Q15678 1187 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 INF2Q27J81 1249 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 XKR3Q5GH77 459 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 NOMO2Q5JPE7 1267 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 UBXN11Q5T124 520 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 CES5AQ6NT32 575 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 ASCL5Q7RTU5 278 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 DDX53Q86TM3 631 aaKnown RBP6.57□□□□□ -1.36
GYPB-205ENST00000505583 BLIDQ8IZY5 108 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 CCDC148Q8NFR7 591 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 BICD2Q8TD16 824 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 ATOH1Q92858 354 aaPredicted RBP6.57□□□□□ -1.36
GYPB-205ENST00000505583 TMEM143Q96AN5 459 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 TMEM169Q96HH4 297 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 TRAIPQ9BWF2 469 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 MRPL9Q9BYD2 267 aaKnown RBP6.57□□□□□ -1.36
GYPB-205ENST00000505583 GCOM2Q9BZD3 368 aaPredicted RBP6.57□□□□□ -1.36
GYPB-205ENST00000505583 SH3GLB2Q9NR46 395 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 CHST12Q9NRB3 414 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 VAV3Q9UKW4 847 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 KCNJ14Q9UNX9 436 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 NR2E1Q9Y466 385 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 PCDHB2Q9Y5E7 798 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 IRAK3Q9Y616 596 aa6.57□□□□□ -1.36
GYPB-205ENST00000505583 COL4A3Q01955 1670 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 FAM205CA6NFA0 338 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 PI15O43692 258 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 N4BP1O75113 896 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 POMCP01189 267 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 CNPP09543 421 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 SRGAP2CP0DJJ0 459 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 NPR3P17342 541 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 SFPQP23246 707 aaKnown RBP eCLIP6.56□□□□□ -1.36
GYPB-205ENST00000505583 HOXA11P31270 313 aaPredicted RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 MTHFRP42898 656 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 SSRP1Q08945 709 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 STK3Q13188 491 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 EARS2Q5JPH6 523 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 ATAT1Q5SQI0 421 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 CWF19L1Q69YN2 538 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 KIAA1841Q6NSI8 718 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 POTEGQ6S5H5 508 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 GLB1LQ6UWU2 654 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 RUFY3Q7L099 469 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 TAS1R1Q7RTX1 841 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 CATSPER4Q7RTX7 472 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 MRPL10Q7Z7H8 261 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 ZNF410Q86VK4 478 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 UBALD2Q8IYN6 164 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 ZDHHC14Q8IZN3 488 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 ZNF710Q8N1W2 664 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 DAGLBQ8NCG7 672 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 SMG8Q8ND04 991 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 RDM1Q8NG50 284 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 PRPF31Q8WWY3 499 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 HAS1Q92839 578 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 SNX27Q96L92 541 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 NECTIN4Q96NY8 510 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 KLHL5Q96PQ7 755 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 PRRX2Q99811 253 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 ZSWIM6Q9HCJ5 1215 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 KCNMB3Q9NPA1 279 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 CYP26B1Q9NR63 512 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 AGPAT5Q9NUQ2 364 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 MARCH5Q9NX47 278 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 RGL1Q9NZL6 768 aa6.56□□□□□ -1.36
GYPB-205ENST00000505583 DDX25Q9UHL0 483 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 DBR1Q9UK59 544 aaKnown RBP6.56□□□□□ -1.36
GYPB-205ENST00000505583 MTCL1Q9Y4B5 1905 aaKnown RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 DMDP11532 3685 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 DOCK8Q8NF50 2099 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 A0A087WWV3 80 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 C2CD2LO14523 706 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 NRP1O14786 923 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 NARSO43776 548 aaKnown RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 ST18O60284 1047 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms