RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	STBD1	O95210	358 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	CTSA	P10619	480 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	KLRC2	P26717	231 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	RBM10	P98175	930 aa	Known RBP	18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	CTTN	Q14247	550 aa	Known RBP	18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	NPY5R	Q15761	445 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	PTPN21	Q16825	1174 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	ERICH6B	Q5W0A0	696 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	KIAA1841	Q6NSI8	718 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	FERMT3	Q86UX7	667 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	PLCD3	Q8N3E9	789 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	VN1R2	Q8NFZ6	395 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	ERMN	Q8TAM6	284 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	ACSF2	Q96CM8	615 aa	Predicted RBP	18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	TMEM175	Q9BSA9	504 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	MRPL17	Q9NRX2	175 aa	Known RBP	18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	ANKEF1	Q9NU02	776 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	RGL1	Q9NZL6	768 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	UROD	P06132	367 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	GALT	P07902	379 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	SP100	P23497	879 aa	Predicted RBP	18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	NEK4	P51957	841 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	PTPN5	P54829	565 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	MTMR3	Q13615	1198 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	RARS2	Q5T160	578 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	UBALD2	Q8IYN6	164 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	FBXL6	Q8N531	539 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	TDRD5	Q8NAT2	981 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	OXER1	Q8TDS5	423 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	CEP89	Q96ST8	783 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	S1PR5	Q9H228	398 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	NRDE2	Q9H7Z3	1164 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	TTC12	Q9H892	705 aa	Predicted RBP	18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	IFT122	Q9HBG6	1241 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	IRAK3	Q9Y616	596 aa		18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	MYH9	P35579	1960 aa	Known RBP	18.22	■□□□□ 0.51
DDR1-256	ENST00000505066	TXK	P42681	527 aa		18.21	■□□□□ 0.51
DDR1-256	ENST00000505066	SYCE2	Q6PIF2	218 aa		18.21	■□□□□ 0.51
DDR1-256	ENST00000505066	HAS1	Q92839	578 aa		18.21	■□□□□ 0.51
DDR1-256	ENST00000505066	GTF3C6	Q969F1	213 aa		18.21	■□□□□ 0.51
DDR1-256	ENST00000505066	FBXL18	Q96ME1	805 aa		18.21	■□□□□ 0.51
DDR1-256	ENST00000505066	ZBP1	Q9H171	429 aa		18.21	■□□□□ 0.51
DDR1-256	ENST00000505066	SSB	P05455	408 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	NCL	P19338	710 aa	Known RBP	18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	OR1G1	P47890	313 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	SLC11A1	P49279	550 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	POU5F1B	Q06416	359 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	NR5A1	Q13285	461 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	MRPL10	Q7Z7H8	261 aa	Known RBP	18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	ALYREF	Q86V81	257 aa	Known RBP	18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	DIS3L2	Q8IYB7	885 aa	Known RBP	18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	NECAB1	Q8N987	351 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	COLEC11	Q9BWP8	271 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	SFXN1	Q9H9B4	322 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	SORCS3	Q9UPU3	1222 aa		18.2	■□□□□ 0.5
DDR1-256	ENST00000505066	SLITRK3	O94933	977 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	LYPLA2	O95372	231 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	POMC	P01189	267 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	ADH1A	P07327	375 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	XRCC6	P12956	609 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	FOSB	P53539	338 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	KCNC3	Q14003	757 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	ZBTB8OS	Q8IWT0	167 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	MCPH1	Q8NEM0	835 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	RPS6KC1	Q96S38	1066 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	MFSD1	Q9H3U5	465 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	GJB4	Q9NTQ9	266 aa		18.19	■□□□□ 0.5
DDR1-256	ENST00000505066	REV3L	O60673	3130 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	ATP2B1	P20020	1258 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	PTEN	P60484	403 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	NHLH1	Q02575	133 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	AGMO	Q6ZNB7	445 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	CCDC149	Q6ZUS6	474 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	OTOP3	Q7RTS5	596 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	ZNF579	Q8NAF0	562 aa	Known RBP	18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	KREMEN2	Q8NCW0	462 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	AUTS2	Q8WXX7	1259 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	APOL6	Q9BWW8	343 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	CSRNP2	Q9H175	543 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	DNAJB4	Q9UDY4	337 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	DAXX	Q9UER7	740 aa	Predicted RBP	18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	GIT1	Q9Y2X7	761 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	EVPL	Q92817	2033 aa		18.18	■□□□□ 0.5
DDR1-256	ENST00000505066	LRRIQ4	A6NIV6	560 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	BTBD18	B2RXH4	712 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	NRP1	O14786	923 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	CREM	Q03060	361 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	ME3	Q16798	604 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	ZNF280B	Q86YH2	543 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	FAM184A	Q8NB25	1140 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	STAM	Q92783	540 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	NACC1	Q96RE7	527 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	POMK	Q9H5K3	350 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	NOL7	Q9UMY1	257 aa	Known RBP	18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	UST	Q9Y2C2	406 aa		18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	PRG3	Q9Y2Y8	225 aa	Predicted RBP	18.17	■□□□□ 0.5
DDR1-256	ENST00000505066	IPP	Q9Y573	584 aa		18.17	■□□□□ 0.5

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