RNA–Protein interactions for RNA: ENST00000505016.2

MATR3-234, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-234ENST00000505016 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
MATR3-234ENST00000505016 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
MATR3-234ENST00000505016 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
MATR3-234ENST00000505016 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
MATR3-234ENST00000505016 ALDH7A1P49419 539 aaKnown RBP13.68□□□□□ -0.22
MATR3-234ENST00000505016 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
MATR3-234ENST00000505016 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
MATR3-234ENST00000505016 MRPL43Q8N983 215 aaKnown RBP13.68□□□□□ -0.22
MATR3-234ENST00000505016 FBXL18Q96ME1 805 aa13.68□□□□□ -0.22
MATR3-234ENST00000505016 JPH2Q9BR39 696 aaPredicted RBP13.68□□□□□ -0.22
MATR3-234ENST00000505016 SLC4A5Q9BY07 1137 aa13.68□□□□□ -0.22
MATR3-234ENST00000505016 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
MATR3-234ENST00000505016 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
MATR3-234ENST00000505016 CDH22Q9UJ99 828 aa13.68□□□□□ -0.22
MATR3-234ENST00000505016 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
MATR3-234ENST00000505016 ZBTB39O15060 712 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.22
MATR3-234ENST00000505016 SRGAP2BP0DMP2 458 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 GCFC2P16383 781 aaKnown RBP13.67□□□□□ -0.22
MATR3-234ENST00000505016 ZXDAP98168 799 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 NBR1Q14596 966 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 TRIM67Q6ZTA4 783 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
MATR3-234ENST00000505016 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
MATR3-234ENST00000505016 AUTS2Q8WXX7 1259 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 RNF166Q96A37 237 aaPredicted RBP13.67□□□□□ -0.22
MATR3-234ENST00000505016 TMEM143Q96AN5 459 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 LXNQ9BS40 222 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 DHX33Q9H6R0 707 aaKnown RBP13.67□□□□□ -0.22
MATR3-234ENST00000505016 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 MINDY3Q9H8M7 445 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 TBC1D13Q9NVG8 400 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 HCFC2Q9Y5Z7 792 aa13.67□□□□□ -0.22
MATR3-234ENST00000505016 TECTAO75443 2155 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 M0R296 226 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 TBX3O15119 743 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 B4GALT3O60512 393 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.221e-323■■■■■ 141.5
MATR3-234ENST00000505016 CLASP2O75122 1294 aaKnown RBP13.66□□□□□ -0.22
MATR3-234ENST00000505016 ZNF623O75123 536 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 OFD1O75665 1012 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 CXCL14O95715 111 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 SKIP12755 728 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
MATR3-234ENST00000505016 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
MATR3-234ENST00000505016 XBP1P17861 261 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
MATR3-234ENST00000505016 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
MATR3-234ENST00000505016 CA8P35219 290 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 RAB27AP51159 221 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
MATR3-234ENST00000505016 AK2P54819 239 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 NR5A1Q13285 461 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 EPHA7Q15375 998 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 NOMO2Q5JPE7 1267 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 VPS52Q8N1B4 723 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 CASP10Q92851 521 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
MATR3-234ENST00000505016 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
MATR3-234ENST00000505016 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 MARCH6O60337 910 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 LARGE1O95461 756 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 GALTP07902 379 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
MATR3-234ENST00000505016 NHLH1Q02575 133 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 CTTNQ14247 550 aaKnown RBP13.65□□□□□ -0.22
MATR3-234ENST00000505016 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 BMP8AQ7Z5Y6 402 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
MATR3-234ENST00000505016 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
MATR3-234ENST00000505016 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
MATR3-234ENST00000505016 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
MATR3-234ENST00000505016 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
MATR3-234ENST00000505016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
MATR3-234ENST00000505016 KRT2P35908 639 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms