RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 F2P00734 622 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 GNAT1P11488 350 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 PTGS1P23219 599 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 SFPQP23246 707 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX41-203ENST00000504781 LAMTOR4Q0VGL1 99 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
DDX41-203ENST00000504781 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 TRIM50Q86XT4 487 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
DDX41-203ENST00000504781 ZBTB8OSQ8IWT0 167 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 FAM186BQ8IYM0 893 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 ASAP3Q8TDY4 903 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 CACTINQ8WUQ7 758 aaKnown RBP11.09□□□□□ -0.63
DDX41-203ENST00000504781 TRIB2Q92519 343 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 FBXL18Q96ME1 805 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 PANX2Q96RD6 677 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 HTATIP2Q9BUP3 242 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 UPF3AQ9H1J1 476 aaKnown RBP11.09□□□□□ -0.63
DDX41-203ENST00000504781 TMX1Q9H3N1 280 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 CAPN11Q9UMQ6 739 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
DDX41-203ENST00000504781 ZMYM2Q9UBW7 1377 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 A0A1W2PQJ5 194 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 GTPBP10A4D1E9 387 aaKnown RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 LRRIQ4A6NIV6 560 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 ESPNB1AK53 854 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 PMM2O15305 246 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 STX10O60499 249 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 KRT13P13646 458 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 PTENP60484 403 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 RBL2Q08999 1139 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 GRIK4Q16099 956 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 FSCN1Q16658 493 aaKnown RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 MAPK6Q16659 721 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 TSR1Q2NL82 804 aaKnown RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 CDCA2Q69YH5 1023 aaPredicted RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 ZPBP2Q6X784 338 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 INTS8Q75QN2 995 aaKnown RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 USP37Q86T82 979 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 CNGA4Q8IV77 575 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 NME8Q8N427 588 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 METTL13Q8N6R0 699 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 LINC01465Q8N7H1 131 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 TRPV1Q8NER1 839 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 ZNF397Q8NF99 534 aaPredicted RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 TMC2Q8TDI7 906 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 KAT2BQ92831 832 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 NAA15Q9BXJ9 866 aaKnown RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
DDX41-203ENST00000504781 LUC7L2Q9Y383 392 aaKnown RBP11.08□□□□□ -0.64
DDX41-203ENST00000504781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX41-203ENST00000504781 MBLAC1A4D2B0 266 aaPredicted RBP11.07□□□□□ -0.64
DDX41-203ENST00000504781 ANKRD63C9JTQ0 380 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 P4HA2O15460 535 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 AFPP02771 609 aaKnown RBP11.07□□□□□ -0.64
DDX41-203ENST00000504781 HMGCRP04035 888 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 SRGAP2CP0DJJ0 459 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 RARBP10826 455 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 SKILP12757 684 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 MSNP26038 577 aaKnown RBP11.07□□□□□ -0.64
DDX41-203ENST00000504781 ADSSP30520 456 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 KCNJ6P48051 423 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 CASP4P49662 377 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 PSEN2P49810 448 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 LIG4P49917 911 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 ADAM17P78536 824 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
DDX41-203ENST00000504781 TRIM32Q13049 653 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 PPFIA1Q13136 1202 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 CAPSQ13938 189 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 MFSD10Q14728 455 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 PCBP1Q15365 356 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDX41-203ENST00000504781 FAM187BQ17R55 369 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 GNASQ5JWF2 1037 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 TAS1R3Q7RTX0 852 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 RHPN2Q8IUC4 686 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 TC2NQ8N9U0 490 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 RNF149Q8NC42 400 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 OR8K1Q8NGG5 319 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 MFSD14AQ96MC6 490 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 ZNF830Q96NB3 372 aaPredicted RBP11.07□□□□□ -0.64
DDX41-203ENST00000504781 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDX41-203ENST00000504781 NUCKS1Q9H1E3 243 aaKnown RBP11.07□□□□□ -0.64
DDX41-203ENST00000504781 FZD8Q9H461 694 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 SIK3Q9Y2K2 1263 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 DAAM1Q9Y4D1 1078 aa11.07□□□□□ -0.64
DDX41-203ENST00000504781 EVPLQ92817 2033 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 SMIM35A0A1B0GVV1 85 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 ZNF233A6NK53 670 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 ACKR2O00590 384 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 MSCO60682 206 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 N4BP1O75113 896 aaKnown RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 RPLP2P05387 115 aaKnown RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 MYL3P08590 195 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms