RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RSRC2Q7L4I2 434 aaKnown RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 MGARPQ8TDB4 240 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 GOLPH3Q9H4A6 298 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ZWILCHQ9H900 591 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 CYP26B1Q9NR63 512 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 DNAJC17Q9NVM6 304 aaKnown RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 APEX2Q9UBZ4 518 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 IRF6O14896 467 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 BUB1BO60566 1050 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 GNA15P30679 374 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ARL1P40616 181 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 EFNA5P52803 228 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 E2F4Q16254 413 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 RFX6Q8HWS3 928 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 CBWD2Q8IUF1 395 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 RHOT2Q8IXI1 618 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 MIS12Q9H081 205 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 LRRC4Q9HBW1 653 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 AGO4Q9HCK5 861 aaKnown RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ANKEF1Q9NU02 776 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ESYT3A0FGR9 886 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 GH1P01241 217 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 OATP04181 439 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 PCNX4Q63HM2 1172 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 TATDN1Q6P1N9 297 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 XRRA1Q6P2D8 792 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 MTMR9Q96QG7 549 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 GBA2Q9HCG7 927 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 A1CFQ9NQ94 594 aaKnown RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 CPA4Q9UI42 421 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ATP8A1Q9Y2Q0 1164 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 EBAG9O00559 213 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ZNF185O15231 689 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-207ENST00000504761 CLCN3P51790 818 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 TMEM35BQ8NCS4 154 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 KIF12Q96FN5 646 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ABCB6Q9NP58 842 aa15.13■□□□□ 0.01
TCOF1-207ENST00000504761 ABCC6O95255 1503 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 SGK1O00141 431 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 NDUFAB1O14561 156 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 MED7O43513 233 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 AKAP3O75969 853 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 PPP2R5EQ16537 467 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 GSPT2Q8IYD1 628 aaKnown RBP15.12■□□□□ 0.01
TCOF1-207ENST00000504761 GCOM2Q9BZD3 368 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-207ENST00000504761 ITIH6Q6UXX5 1313 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 SLC16A3O15427 465 aaKnown RBP15.12■□□□□ 0.01
TCOF1-207ENST00000504761 STK10O94804 968 aaKnown RBP15.12■□□□□ 0.01
TCOF1-207ENST00000504761 ATF2P15336 505 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 LY6KQ17RY6 165 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 EFCC1Q9HA90 598 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 NPTX2P47972 431 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 OSBPL9Q96SU4 736 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 TBX20Q9UMR3 447 aa15.12■□□□□ 0.01
TCOF1-207ENST00000504761 PIN4Q9Y237 131 aaKnown RBP15.12■□□□□ 0.01
TCOF1-207ENST00000504761 A6NJR5 290 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 GNAT1P11488 350 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 APBA1Q02410 837 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 SLC18A3Q16572 532 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 CDKAL1Q5VV42 579 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 TTC19Q6DKK2 380 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ANKRD42Q8N9B4 389 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 PBKQ96KB5 322 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 NUP85Q9BW27 656 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 EDEM3Q9BZQ6 932 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 PIK3R2O00459 728 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 RGPD1P0DJD0 1748 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ZBTB16Q05516 673 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 PASKQ96RG2 1323 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 POP1Q99575 1024 aaKnown RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 DNAJC18Q9H819 358 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 SLC38A10Q9HBR0 1119 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 NFU1Q9UMS0 254 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 CCDC151A5D8V7 595 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 RGS16O15492 202 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 MDM2Q00987 491 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 KCNA1Q09470 495 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 MXD4Q14582 209 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 IL31RAQ8NI17 732 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 RNF25Q96BH1 459 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ERGIC2Q96RQ1 377 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 DDX47Q9H0S4 455 aaKnown RBP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 PLCB1Q9NQ66 1216 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ERAP1Q9NZ08 941 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 PCSK1NQ9UHG2 260 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.01
TCOF1-207ENST00000504761 IVLP07476 585 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 GALCP54803 685 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 RWDD2BP57060 319 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ERVK-24P63145 666 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 TNFAIP2Q03169 654 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ZNF720Q7Z2F6 126 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 ZNF564Q8TBZ8 553 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms