RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MSANTD4Q8NCY6 345 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 SLC17A8Q8NDX2 589 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 ATP6V0A1Q93050 837 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 IWS1Q96ST2 819 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 ANKZF1Q9H8Y5 726 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 SLC9A2Q9UBY0 812 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 ADAMTS1Q9UHI8 967 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 TMA7Q9Y2S6 64 aaKnown RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 TISP43B9A030 160 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 KRT13P13646 458 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 SNRPFP62306 86 aaKnown RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 CBX1P83916 185 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 HSP90B2PQ58FF3 399 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 TTC30AQ86WT1 665 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 RDH13Q8NBN7 331 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 NOA1Q8NC60 698 aaKnown RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 NCAPGQ9BPX3 1015 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 SUN2Q9UH99 717 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 KIAA1217Q5T5P2 1943 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 LCTP09848 1927 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 ZNF16P17020 682 aaPredicted RBP12.56□□□□□ -0.4
USP46-204ENST00000503060 MYL7Q01449 175 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 SWSAP1Q6NVH7 229 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 CAPZA3Q96KX2 299 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 MMS19Q96T76 1030 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
USP46-204ENST00000503060 IFT122Q9HBG6 1241 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 FAM53CQ9NYF3 392 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 SNX12Q9UMY4 172 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 TELO2Q9Y4R8 837 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 PTPRFP10586 1907 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 ERICH4A6NGS2 130 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 FERP16591 822 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 ANXA13P27216 316 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 STAT1P42224 750 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 ACTR2P61160 394 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 BMS1Q14692 1282 aaKnown RBP12.56□□□□□ -0.4
USP46-204ENST00000503060 BRD3Q15059 726 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 NAB2Q15742 525 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 C10orf76Q5T2E6 689 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 CC2D1AQ6P1N0 951 aaPredicted RBP12.56□□□□□ -0.4
USP46-204ENST00000503060 ABHD15Q6UXT9 468 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 INTS8Q75QN2 995 aaKnown RBP12.56□□□□□ -0.4
USP46-204ENST00000503060 ANKRD35Q8N283 1001 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 XXYLT1Q8NBI6 393 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 DNERQ8NFT8 737 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 RETREG1Q9H6L5 497 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 BTBD7Q9P203 1132 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
USP46-204ENST00000503060 BUB1O43683 1085 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 SEC31AO94979 1220 aaKnown RBP12.55□□□□□ -0.4
USP46-204ENST00000503060 PRLRP16471 622 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 NPTX2P47972 431 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 IREB2P48200 963 aaKnown RBP12.55□□□□□ -0.4
USP46-204ENST00000503060 SMTNP53814 917 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 SP4Q02446 784 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 STXBP2Q15833 593 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 CCDC70Q6NSX1 233 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 GADL1Q6ZQY3 521 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 RIOX2Q8IUF8 465 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 CCDC60Q8IWA6 550 aaPredicted RBP12.55□□□□□ -0.4
USP46-204ENST00000503060 TMEM161BQ8NDZ6 487 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 KIFAP3Q92845 792 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 RPGRIP1Q96KN7 1286 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 PNKPQ96T60 521 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 PACSIN1Q9BY11 444 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 STK33Q9BYT3 514 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 DNAJC12Q9UKB3 198 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 RAB21Q9UL25 225 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 EXOC7Q9UPT5 735 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 DAAM1Q9Y4D1 1078 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 A0A0G2JMZ2 1700 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 WDR81Q562E7 1941 aa12.55□□□□□ -0.4
USP46-204ENST00000503060 CCDC151A5D8V7 595 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 ZNF185O15231 689 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 MAPK13O15264 365 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 PEX10O60683 326 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 RHOXF2BP0C7M4 288 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 KLRC1P26715 233 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 ICAM3P32942 547 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 VAMP7P51809 220 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 TBX4P57082 545 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms