RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 HOXC10Q9NYD6 342 aa6.94□□□□□ -1.3
LINC00939-201ENST00000502479 MYPNQ86TC9 1320 aa6.94□□□□□ -1.3
LINC00939-201ENST00000502479 IGLV3-22A0A075B6J6 115 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 NCK2O43639 380 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 EXTL3O43909 919 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 EVI5O60447 810 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 ATP2A2P16615 1042 aaKnown RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 INPP5BP32019 993 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 HSPA1LP34931 641 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 RAD51AP2Q09MP3 1159 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 MKRN3Q13064 507 aaKnown RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 KCNK18Q7Z418 384 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 SLFN11Q7Z7L1 901 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 BANK1Q8NDB2 785 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 SLC35C1Q96A29 364 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 TTC25Q96NG3 672 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 FMO2Q99518 471 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 TLR10Q9BXR5 811 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 LACRTQ9GZZ8 138 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 C2orf40Q9H1Z8 148 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 PIM2Q9P1W9 311 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 NFU1Q9UMS0 254 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 NDUFAB1O14561 156 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 AGTP01019 485 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 CALB1P05937 261 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 ALAS1P13196 640 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 KRT5P13647 590 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 PIK3CAP42336 1068 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 RIBC1Q8N443 379 aaPredicted RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 HES6Q96HZ4 224 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 FAM124BQ9H5Z6 455 aaPredicted RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 RAB20Q9NX57 234 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 PCDHA10Q9Y5I2 948 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 ZNF233A6NK53 670 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 PLEKP08567 350 aaPredicted RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 MYCLP12524 364 aaPredicted RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 KLRC1P26715 233 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 PPP2R2AP63151 447 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 DALRD3Q5D0E6 543 aaKnown RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 IRF2BP2Q7Z5L9 587 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 YTHDF3Q7Z739 585 aaKnown RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 SRLQ86TD4 932 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 DEPTORQ8TB45 409 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 RBM41Q96IZ5 413 aaKnown RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 NUDT12Q9BQG2 462 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 STXBP5LQ9Y2K9 1186 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 RNF225M0QZC1 329 aaPredicted RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 CYP1A2P05177 515 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 PMS2P54278 862 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 DRG2P55039 364 aaKnown RBP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 NFIAQ12857 509 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 ZBTB8OSQ8IWT0 167 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 DNERQ8NFT8 737 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 CASKIN2Q8WXE0 1202 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 CENPHQ9H3R5 247 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 WHRNQ9P202 907 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 BCCIPQ9P287 314 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC00939-201ENST00000502479 TBX20Q9UMR3 447 aa6.93□□□□□ -1.3
LINC00939-201ENST00000502479 EMSYQ7Z589 1322 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 ADAMTS3O15072 1205 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 PHACTR2O75167 634 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 AKAP3O75969 853 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 NSFP46459 744 aaKnown RBP6.92□□□□□ -1.3
LINC00939-201ENST00000502479 GALCP54803 685 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 PTENP60484 403 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 PGM5Q15124 567 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.92□□□□□ -1.3
LINC00939-201ENST00000502479 HAUS6Q7Z4H7 955 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 FBXL13Q8NEE6 735 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
LINC00939-201ENST00000502479 PAGR1Q9BTK6 254 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 PXMP2Q9NR77 195 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 DDX39AO00148 427 aaKnown RBP6.92□□□□□ -1.3
LINC00939-201ENST00000502479 RAD51CO43502 376 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 FGGP02679 453 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 SLC9A1P19634 815 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 NMT1P30419 496 aaKnown RBP6.92□□□□□ -1.3
LINC00939-201ENST00000502479 PHBP35232 272 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 GPC3P51654 580 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 TNFAIP2Q03169 654 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 SUPT20HL1Q3ZLR7 823 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 EMC10Q5UCC4 262 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 CCDC105Q8IYK2 499 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 GIMAP7Q8NHV1 300 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 SLC30A5Q8TAD4 765 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 PIGOQ8TEQ8 1089 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 SCFD2Q8WU76 684 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 SNF8Q96H20 258 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 VCPIP1Q96JH7 1222 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 ZSWIM1Q9BR11 485 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 EPC1Q9H2F5 836 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 ACAD9Q9H845 621 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 MYOZ2Q9NPC6 264 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
LINC00939-201ENST00000502479 KCNH7Q9NS40 1196 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 DMAC2Q9NW81 257 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 ZNF219Q9P2Y4 722 aaPredicted RBP6.92□□□□□ -1.3
LINC00939-201ENST00000502479 IP6K2Q9UHH9 426 aa6.92□□□□□ -1.3
LINC00939-201ENST00000502479 TMEM59LQ9UK28 342 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms