RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 ANKRD54Q6NXT1 300 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 MIER3Q7Z3K6 550 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 ZBTB33Q86T24 672 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 LINC01465Q8N7H1 131 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 PRR7Q8TB68 274 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 SUSD6Q92537 303 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 LENG9Q96B70 501 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 NECTIN4Q96NY8 510 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 NIFKQ9BYG3 293 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 ZNF862O60290 1169 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 SFPQP23246 707 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■□□□□ 10.5
UBE2D3-211ENST00000502404 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 EVCP57679 992 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 ITIH3Q06033 890 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 SIGLEC14Q08ET2 396 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 GIT2Q14161 759 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 MOXD1Q6UVY6 613 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 LRRC55Q6ZSA7 311 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 FBXL6Q8N531 539 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 MRPL43Q8N983 215 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 TBCKQ8TEA7 893 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 TMEM169Q96HH4 297 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 UNC45AQ9H3U1 944 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 STK39Q9UEW8 545 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 PCDHA4Q9UN74 947 aa12.5□□□□□ -0.41
UBE2D3-211ENST00000502404 CYP3A7-CYP3A51PA0A087WV96 503 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 PSMD10O75832 226 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 DEXIO95424 95 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 CXCL14O95715 111 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 CYP3A7P24462 503 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 CA8P35219 290 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 KCNC3Q14003 757 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 TARBP2Q15633 366 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 MTERF2Q49AM1 385 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 LLGL2Q6P1M3 1020 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 GLB1LQ6UWU2 654 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 RUFY3Q7L099 469 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 ZNF410Q86VK4 478 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 BLIDQ8IZY5 108 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 SLC39A11Q8N1S5 342 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 PGBD4Q96DM1 585 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 ZNF274Q96GC6 653 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 RIPOR3Q96MK2 946 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 TRAIPQ9BWF2 469 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 S1PR5Q9H228 398 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 CYP46A1Q9Y6A2 500 aa12.49□□□□□ -0.41
UBE2D3-211ENST00000502404 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 HIDE1A8MVS5 230 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 ADAMTS3O15072 1205 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 XBP1P17861 261 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 MTHFRP42898 656 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 RAB27AP51159 221 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 BCAR1P56945 870 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 PSMC5P62195 406 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 RNASELQ05823 741 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 NONOQ15233 471 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 CLLU1OSQ5K130 101 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 SYCE2Q6PIF2 218 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 ZNF598Q86UK7 904 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 VN1R2Q8NFZ6 395 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 HELQQ8TDG4 1101 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 NAP1L4Q99733 375 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 ADAM7Q9H2U9 754 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 NCOA5Q9HCD5 579 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 RNF19AQ9NV58 838 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 DZANK1Q9NVP4 752 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 SUCLA2Q9P2R7 463 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 PPME1Q9Y570 386 aa12.48□□□□□ -0.41
UBE2D3-211ENST00000502404 ATG2AQ2TAZ0 1938 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 KIAA1671Q9BY89 1806 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 A0A087WZ62 844 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 MARCH6O60337 910 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 CDKL5O76039 1030 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 PHKA2P46019 1235 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 UGCGQ16739 394 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 ATAT1Q5SQI0 421 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 PPFIBP1Q86W92 1011 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 SKAP1Q86WV1 359 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 RHPN2Q8IUC4 686 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 DAGLBQ8NCG7 672 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 URGCPQ8TCY9 931 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 SLC7A3Q8WY07 619 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 FAM20AQ96MK3 541 aa12.47□□□□□ -0.41
UBE2D3-211ENST00000502404 FDXACB1Q9BRP7 624 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms