RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 STAMQ92783 540 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 RAD9AQ99638 391 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 PBX4Q9BYU1 374 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 TRIM9Q9C026 710 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 ELAC1Q9H777 363 aaKnown RBP17.15■□□□□ 0.34
CPNE1-228ENST00000498814 SERTAD1Q9UHV2 236 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 MSRAQ9UJ68 235 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 FNDC1Q4ZHG4 1894 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-228ENST00000498814 FRMD3A2A2Y4 597 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 H0YCG3 227 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 B4GALT5O43286 388 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 TLL1O43897 1013 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 TRAK2O60296 914 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 ZNF623O75123 536 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 UPP2O95045 317 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 SKIP12755 728 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 GAP43P17677 238 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 PBX2P40425 430 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 RAB27AP51159 221 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 PRPF4BQ13523 1007 aaKnown RBP17.14■□□□□ 0.33
CPNE1-228ENST00000498814 LONRF3Q496Y0 759 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 TWF2Q6IBS0 349 aaKnown RBP17.14■□□□□ 0.33
CPNE1-228ENST00000498814 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 NOTUMQ6P988 496 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 ECHDC2Q86YB7 292 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 TMEM87AQ8NBN3 555 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 TMEM161BQ8NDZ6 487 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 C7orf25Q9BPX7 421 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 ZHX3Q9H4I2 956 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 SEL1LQ9UBV2 794 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 INSL6Q9Y581 213 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 CNTNAP2Q9UHC6 1331 aa17.14■□□□□ 0.33
CPNE1-228ENST00000498814 A0A1B0GUA9 196 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 DGKIO75912 1065 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 EOMESO95936 686 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
CPNE1-228ENST00000498814 DNAJB2P25686 324 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 FXR1P51114 621 aaKnown RBP eCLIP17.13■□□□□ 0.33
CPNE1-228ENST00000498814 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 UBXN11Q5T124 520 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 GPR153Q6NV75 609 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 TAS1R3Q7RTX0 852 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 HAUS6Q7Z4H7 955 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 SLC17A8Q8NDX2 589 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 FAM105AQ9NUU6 356 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 PANK4Q9NVE7 773 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 YBX2Q9Y2T7 364 aaKnown RBP17.13■□□□□ 0.33
CPNE1-228ENST00000498814 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
CPNE1-228ENST00000498814 TTLL13PA6NNM8 815 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 ZNF202O95125 648 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 EDN1P05305 212 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 IDEP14735 1019 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 MYOGP15173 224 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 LIG1P18858 919 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 ABCD1P33897 745 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 NT5DC1Q5TFE4 455 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 ZNF598Q86UK7 904 aaKnown RBP17.12■□□□□ 0.33
CPNE1-228ENST00000498814 SFR1Q86XK3 245 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 FAM178BQ8IXR5 827 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 CCDC65Q8IXS2 484 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-228ENST00000498814 ZNF689Q96CS4 500 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-228ENST00000498814 PAGE5Q96GU1 130 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 YME1L1Q96TA2 773 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 ST6GALNAC4Q9H4F1 302 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 RC3H2Q9HBD1 1191 aaKnown RBP17.12■□□□□ 0.33
CPNE1-228ENST00000498814 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
CPNE1-228ENST00000498814 N4BP3O15049 544 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 MYL1P05976 194 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-228ENST00000498814 AFMP43652 599 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 STRN3Q13033 797 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 HERC4Q5GLZ8 1057 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-228ENST00000498814 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 ZNF720Q7Z2F6 126 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 MRPL10Q7Z7H8 261 aaKnown RBP17.11■□□□□ 0.33
CPNE1-228ENST00000498814 FMR1NBQ8N0W7 255 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-228ENST00000498814 CNNM3Q8NE01 707 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 ENGASEQ8NFI3 743 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 TIFAQ96CG3 184 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
CPNE1-228ENST00000498814 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 TNFSF13BQ9Y275 285 aa17.11■□□□□ 0.33
CPNE1-228ENST00000498814 NLRC5Q86WI3 1866 aa17.1■□□□□ 0.33
CPNE1-228ENST00000498814 TMEM265A0A087WTH1 108 aa17.1■□□□□ 0.33
CPNE1-228ENST00000498814 K7ENM7 598 aa17.1■□□□□ 0.33
CPNE1-228ENST00000498814 HOXA2O43364 376 aa17.1■□□□□ 0.33
CPNE1-228ENST00000498814 CA3P07451 260 aa17.1■□□□□ 0.33
CPNE1-228ENST00000498814 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms