RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 PUF60Q9UHX1 559 aaKnown RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 MRPS17Q9Y2R5 130 aaKnown RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 MAP4K5Q9Y4K4 846 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 PCDHB9Q9Y5E1 797 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 WASF2Q9Y6W5 498 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 MED13Q9UHV7 2174 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 ADAMTS9Q9P2N4 1935 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 PCDH15Q96QU1 1955 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 MPHOSPH10O00566 681 aaKnown RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 KHNYNO15037 678 aaKnown RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 SRGAP3O43295 1099 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 DIAPH2O60879 1101 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 CHRNA1P02708 482 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 LAG3P18627 525 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ALDH5A1P51649 535 aaPredicted RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 IRX4P78413 519 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 NFKB2Q00653 900 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 TLE3Q04726 772 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ARHGAP1Q07960 439 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 VAC14Q08AM6 782 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 NFATC3Q12968 1075 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 MTX1Q13505 466 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ARID5BQ14865 1188 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ATP2B3Q16720 1220 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 RABL6Q3YEC7 729 aaPredicted RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ZNF787Q6DD87 383 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 PI16Q6UXB8 463 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ATG14Q6ZNE5 492 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 LRRC69Q6ZNQ3 347 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 TMEM179Q6ZVK1 233 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 GET4Q7L5D6 327 aaPredicted RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 VASH1Q7L8A9 365 aaPredicted RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 TMPRSS7Q7RTY8 843 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 DHX37Q8IY37 1157 aaKnown RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 AUTS2Q8WXX7 1259 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 CCDC136Q96JN2 1154 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 KATNAL1Q9BW62 490 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 RHOBTB2Q9BYZ6 727 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 SH2D4AQ9H788 454 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 MKNK2Q9HBH9 465 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 ARHGEF10LQ9HCE6 1279 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 TYW1Q9NV66 732 aaKnown RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 CYP39A1Q9NYL5 469 aa6.1□□□□□ -1.43
FXN-205ENST00000498653 HEMK1Q9Y5R4 338 aaPredicted RBP6.1□□□□□ -1.43
FXN-205ENST00000498653 PDCD11Q14690 1871 aaKnown RBP6.09□□□□□ -1.43
FXN-205ENST00000498653 ZMYM6O95789 1325 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 STAB1Q9NY15 2570 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 PNMA6EA0A0J9YXQ4 647 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 AKAP3O75969 853 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 CCDC192P0DO97 292 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 CHRNB1P11230 501 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 OAZ1P54368 228 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 SRSF11Q05519 484 aaKnown RBP6.09□□□□□ -1.43
FXN-205ENST00000498653 MGAT3Q09327 533 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 HDAC1Q13547 482 aaPredicted RBP6.09□□□□□ -1.43
FXN-205ENST00000498653 WDR44Q5JSH3 913 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 Q6ZS52 159 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 TBC1D9Q6ZT07 1266 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 TOGARAM2Q6ZUX3 1019 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
FXN-205ENST00000498653 FAM26EQ8N5C1 309 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 SSH3Q8TE77 659 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 SCFD2Q8WU76 684 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 ATP6V0A1Q93050 837 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 CDK15Q96Q40 435 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 IRX2Q9BZI1 471 aaPredicted RBP6.09□□□□□ -1.43
FXN-205ENST00000498653 ZBP1Q9H171 429 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 LMAN1LQ9HAT1 526 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 POLMQ9NP87 494 aaPredicted RBP6.09□□□□□ -1.43
FXN-205ENST00000498653 RNF146Q9NTX7 359 aa6.09□□□□□ -1.43
FXN-205ENST00000498653 PI4KAP42356 2102 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 ABCA7Q8IZY2 2146 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 TBKBP1A7MCY6 615 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 NRG2O14511 850 aaPredicted RBP6.08□□□□□ -1.44
FXN-205ENST00000498653 SIAH2O43255 324 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 SUV39H1O43463 412 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 PAPLNO95428 1278 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 ADH1CP00326 375 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 STAG3L1P0CL83 205 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 TXNP10599 105 aaKnown RBP6.08□□□□□ -1.44
FXN-205ENST00000498653 BMP3P12645 472 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 SCG2P13521 617 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 CASTP20810 708 aaKnown RBP6.08□□□□□ -1.44
FXN-205ENST00000498653 ADRA1BP35368 520 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 MAPK8P45983 427 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 PXNP49023 591 aaPredicted RBP6.08□□□□□ -1.44
FXN-205ENST00000498653 CLCN4P51793 760 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 DHX9Q08211 1270 aaKnown RBP6.08□□□□□ -1.44
FXN-205ENST00000498653 G3BP1Q13283 466 aaKnown RBP eCLIP6.08□□□□□ -1.44
FXN-205ENST00000498653 NR5A1Q13285 461 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 HSP90AB4PQ58FF6 505 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 RNF20Q5VTR2 975 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 PDXDC1Q6P996 788 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 CCDC62Q6P9F0 684 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 SLCO6A1Q86UG4 719 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 SIRT2Q8IXJ6 389 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 ZNF707Q96C28 371 aaPredicted RBP6.08□□□□□ -1.44
FXN-205ENST00000498653 CAMK1GQ96NX5 476 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms